CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FGSG_12967
(
Fusarium graminearum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FGSG_12967
T29265_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FGSG_12967T0
RRM
104
166
LIVARLSYEADEKDLEKEFGRFGPIERIRVVTDTHADEKPNKKKKPHRGYAFVVFEREKDMRG
Links
Other
RRM
family RBPs
Other
Fusarium graminearum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
estExt_fgenesh1_pg.C_sca_3_chr4_2_00789
Nectria haematococca
estExt_fgenesh1_pg.C_sca_3_chr4_2_00789
N
0.889
SS1G_11435
Sclerotinia sclerotiorum
SS1G_11435
N
0.825
BC1G_08884
Botrytis cinerea
BC1G_08884
N
0.810