CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FVEG_06399
(
Fusarium verticillioides
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FVEG_06399
T29366_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FVEG_06399T0
RRM
245
302
VYIRGLYPTTDDHTLYQFTSRFGEVETSKAIIDTATGACKGFGFAKFFDESFNSRLKA
FVEG_06399T0
RRM
311
378
LYISNLPKSLTEVELGAIFRDYTILSSKILRDSMGNSRGVGFARFENRDICDDVIERFHGSSVGDEGL
Links
Other
RRM
family RBPs
Other
Fusarium verticillioides
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
FOXG_08275
Fusarium oxysporum
FOXG_08275
N
0.887
VDBG_08298
Verticillium albo atrum
VDBG_08298
N
0.729