VDBG_08298 (Verticillium albo atrum)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 VDBG_08298 T31480_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDBG_08298T0 RRM 243 307
VDBG_08298T0 RRM 331 398

Links

Other RRM family RBPs
Other Verticillium albo atrum RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GLRG_05733 Colletotrichum graminicola GLRG_05733 N 0.843
fgenesh1_pg.C_scaffold_2000270 Trichoderma atroviride fgenesh1_pg.C_scaffold_2000270 N 0.806
FOXG_08275 Fusarium oxysporum FOXG_08275 N 0.805
gw1.1.1031.1 Trichoderma virens gw1.1.1031.1 N 0.799
e_gw1.2.858.1 Trichoderma reesei e_gw1.2.858.1 N 0.784
fgenesh1_pm.sca_18_chr2_1_0000466 Nectria haematococca fgenesh1_pm.sca_18_chr2_1_0000466 N 0.774
estExt_fgenesh1_pg.C_30620 Cryphonectria parasitica estExt_fgenesh1_pg.C_30620 N 0.770
NCU09742 Neurospora crassa NCU09742 N 0.769
fgenesh1_pm.C_scaffold_4000255 Neurospora tetrasperma fgenesh1_pm.C_scaffold_4000255 N 0.769
e_gw1.3.1867.1 Neurospora discreta e_gw1.3.1867.1 N 0.769
CHGG_04655 Chaetomium globosum CHGG_04655 N 0.767
Pa_6_3170 Podospora anserina Pa_6_3170 N 0.759
fgenesh1_pm.1_#_413 Myceliophthora thermophila fgenesh1_pm.1_#_413 N 0.752
fgenesh2_pg.1_#_466 Thielavia terrestris fgenesh2_pg.1_#_466 N 0.752
FVEG_06399 Fusarium verticillioides FVEG_06399 N 0.729
BC1G_03224 Botrytis cinerea BC1G_03224 N 0.714
SS1G_08605 Sclerotinia sclerotiorum SS1G_08605 N 0.707