CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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MCYG_03877
(
Microsporum canis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MCYG_03877
T29698_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCYG_03877T0
RRM
127
172
IYMSSLPPYLKPSALKSMLVARGFGPITKIFLSPYVPSTSTSRAAM
MCYG_03877T0
RRM
172
212
MKASRNKRRMYTDGWVEFASKRTAKICAETLNASIVGGKKG
Links
Other
RRM
family RBPs
Other
Microsporum canis
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_03265
Arthroderma benhamiae
ARB_03265
N
0.900
TERG_05328
Trichophyton rubrum
TERG_05328
N
0.900
TRV_02494
Trichophyton verrucosum
TRV_02494
N
0.889
TESG_04940
Trichophyton tonsurans
TESG_04940
N
0.889
TEQG_03294
Trichophyton equinum
TEQG_03294
N
0.889