CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TRV_02494
(
Trichophyton verrucosum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TRV_02494
T31211_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TRV_02494
RRM
126
171
IYMSSLPPYLKPSALKSMLVARGFGPVTKIFLSPYVPPTSASRAAI
TRV_02494
RRM
168
211
RAAIKASRNKRRMYTDGWVEFESKKTAKICAETLNASIVGGKKG
Links
Other
RRM
family RBPs
Other
Trichophyton verrucosum
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TESG_04940
Trichophyton tonsurans
TESG_04940
N
1.000
TEQG_03294
Trichophyton equinum
TEQG_03294
N
1.000
ARB_03265
Arthroderma benhamiae
ARB_03265
N
0.989
TERG_05328
Trichophyton rubrum
TERG_05328
N
0.989
MCYG_03877
Microsporum canis
MCYG_03877
N
0.889