estExt_fgenesh1_pg.C_30402 (Sporobolomyces roseus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_fgenesh1_pg.C_30402 T50568_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_30402 RRM 66 136

Links

Other RRM family RBPs
Other Sporobolomyces roseus RBPs

9 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_06023 Puccinia graminis PGTG_06023 N 0.789
estExt_Genewise1.C_80010 Melampsora laricis populina estExt_Genewise1.C_80010 N 0.789
PTTG_06790 Puccinia triticina PTTG_06790 N 0.789
fgenesh3_pg.89__57 Postia placenta fgenesh3_pg.89__57 N 0.718
e_gwh1.25.133.1 Laccaria bicolor e_gwh1.25.133.1 N 0.708
estExt_Genewise1.C_41157 Heterobasidion annosum estExt_Genewise1.C_41157 N 0.708
e_gw1.3.1050.1 Tremella mesenterica e_gw1.3.1050.1 N 0.708
estExt_Genewise1Plus.C_11839 Schizophyllum commune estExt_Genewise1Plus.C_11839 N 0.704
Genemark.3378_g Serpula lacrymans Genemark.3378_g N 0.704