CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTRG_02061
(
Pyrenophora tritici repentis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PTRG_02061
T30208_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRT_02061
RRM
761
825
ENGGTEELIIETLGRVGQVNNFRLVYDKETGRPKGFGFAEFADADAAASAVRNLNDYDLMGRKLR
Links
Other
RRM
family RBPs
Other
Pyrenophora tritici repentis
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AB08285.1
Alternaria brassicicola
AB08285.1
N
0.873
estExt_fgenesh1_pg.C_160182
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_160182
N
0.873
SNOG_02685
Stagonospora nodorum
SNOG_02685
N
0.845
EAT89416.2
Phaeosphaeria nodorum
EAT89416.2
N
0.845