CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_06503
(
Puccinia triticina
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PTTG_06503
T30378_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_06503T0
RRM
145
209
LFVCKLNAITRSEDLELIFSRFGPIKDPKTEVSLQYAFIEFDQREDTERAYFKTDGVLINDRRIH
Links
Other
RRM
family RBPs
Other
Puccinia triticina
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_06854
Puccinia triticina
PTTG_06854
N
0.817
PGTG_10482
Puccinia graminis
PGTG_10482
N
0.803
estExt_fgenesh1_kg.C_40083
Melampsora laricis populina
estExt_fgenesh1_kg.C_40083
N
0.803
PGTG_14680
Puccinia graminis
PGTG_14680
N
0.775