CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SPOG_01945
(
Schizosaccharomyces cryophilus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPOG_01945
T30748_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPOG_01945T0
RRM
210
280
IVVKNIPFSLEKDALLEAFKQLGIPRPYAFNYHYDNGIFRGLAFANFYLPEEAQIVVQTLNGYEINSRRLR
Links
Other
RRM
family RBPs
Other
Schizosaccharomyces cryophilus
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cip1
Schizosaccharomyces pombe
SPBC16A3.18
N
0.915
SOCG_00560
Schizosaccharomyces octosporus
SOCG_00560
N
0.704