CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SPRG_01506
(
Saprolegnia parasitica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
SPRG_01506
T30884_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPRG_01506T0
RRM
97
167
IYIGRIPHGFYEKQMKGFFGQFGGIKRLRVSRNKKSGASKHYAFIEFEDPEVAGVVAHTMDGYRLFDRVLA
Links
Other
RRM
family RBPs
Other
Saprolegnia parasitica
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ppa025985m
Prunus persica
ppa025985m
N
0.718
MDP0000340057
Malus x domestica
MDP0000340057
N
0.718
gw1.198.122.1
Physcomitrella patens
gw1.198.122.1
N
0.718
AMAG_03225
Allomyces macrogynus
AMAG_03225
N
0.704
C_scaffold_44000026
Phytophthora ramorum
C_scaffold_44000026
N
0.704