gw1.198.122.1 (Physcomitrella patens)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.198.122.1 T53156_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.198.122.1 RRM 4 74

Links

Other RRM family RBPs
Other Physcomitrella patens RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw1.35.197.1 Physcomitrella patens e_gw1.35.197.1 N 0.915
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.803
GSVIVG00021851001 Vitis vinifera GSVIVG00021851001 N 0.746
estExt_fgenesh2_pg.C_120136 Selaginella moellendorfii estExt_fgenesh2_pg.C_120136 N 0.746
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.746
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.746
YALI0F14245g Yarrowia lipolytica YALI0F14245g N 0.746
PK02111.1 Cannabis sativa PK02111.1 N 0.746
ppa025985m Prunus persica ppa025985m N 0.746
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.746
LOC_Os08g31810 Oryza sativa LOC_Os08g31810 N 0.732
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.732
SOCG_03680 Schizosaccharomyces octosporus SOCG_03680 N 0.732
Sb03g045720 Sorghum bicolor Sb03g045720 N 0.732
e_gw1.8.125.1 Emiliania huxleyi e_gw1.8.125.1 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.718
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.718
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.718
e_gw1.16.107.1 Emiliania huxleyi e_gw1.16.107.1 N 0.718
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.718
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.718
MDP0000340057 Malus x domestica MDP0000340057 N 0.718
SPRG_01506 Saprolegnia parasitica SPRG_01506 N 0.718
estExt_Genewise1Plus.C_30445 Agaricus bisporus estExt_Genewise1Plus.C_30445 N 0.704
GRMZM2G056350 Zea mays GRMZM2G056350 N 0.704
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.704
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.704
PGUG_03493 Candida guilliermondii PGUG_03493 N 0.704
SPCC1827.05c Schizosaccharomyces pombe SPCC1827.05c N 0.704
29428.m000321 Ricinus communis 29428.m000321 N 0.704
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.704
fgenesh1_pm.00609_#_590 Aspergillus carbonarius fgenesh1_pm.00609_#_590 N 0.704
MCYG_01275 Microsporum canis MCYG_01275 N 0.704