CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
PK12998.1
(
Cannabis sativa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PK12998.1
T31685_0.6
Cannabis sativa genome (2012-Feb-20)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK12998.1
RRM
31
97
IKVNNVSLGATDQDLKEFFSFSGEILHLETLSENEQSQVAYVTFKDPKGAETAVLLSGATIVDQPVT
Links
Other
RRM
family RBPs
Other
Cannabis sativa
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Glyma09g33960.1
Glycine max
Glyma09g33960.1
N
0.716
Glyma01g01950.1
Glycine max
Glyma01g01950.1
N
0.716
30073.m002271
Ricinus communis
30073.m002271
N
0.710
ppa024222m
Prunus persica
ppa024222m
N
0.710
Cucsa.322000
Cucumis sativus
Cucsa.322000
N
0.701
AT4G17720
Arabidopsis thaliana
AT4G17720-TAIR-G
N
0.700