CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
DGIL_AUG5s14095g4t3
(
Acyrtosiphon pisum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
DGIL_AUG5s14095g4t3
T32008_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s14095g4t3
RRM
109
178
IVISNLDFGVTSTDIQELFDEFGPLKTATVHYDRSGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMK
Links
Other
RRM
family RBPs
Other
Acyrtosiphon pisum
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.729
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.729
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.729
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.729
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.729
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.729
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.729
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.729
AAH92013
Xenopus laevis
AAH92013
N
0.729
Q58EA2
Xenopus laevis
Q58EA2
N
0.729
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.729
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.729
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.729
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.729
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.729
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.729
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.729
tho4
Danio rerio
ENSDARG00000077732
N
0.729
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.729
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.729
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.729
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.729
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.729
THOC4
Gallus gallus
ENSGALG00000007237
N
0.729
THOC4
Homo sapiens
ENSG00000183684
N
0.729
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.729
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.729
AAH74336
Xenopus laevis
AAH74336
N
0.714
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.714
AGAP006733
Anopheles gambiae
AGAP006733
N
0.714
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.714
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.714
AAEL015263
Aedes aegypti
AAEL015263
N
0.700
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
0.700
AAEL005114
Aedes aegypti
AAEL005114
N
0.700
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.700
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.700
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.700
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
0.700
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.700