CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
AAEL015263
(
Aedes aegypti
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AAEL015263
T32437_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL015263-PA
RRM
117
186
LMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMKQYNGVPLDGRPMS
Links
Other
RRM
family RBPs
Other
Aedes aegypti
RBPs
91 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAEL005114
Aedes aegypti
AAEL005114
N
1.000
CPIJ007834
Culex quinquefasciatus
CPIJ007834
N
1.000
CpipJ_CPIJ007834
Culex pipiens
CpipJ_CPIJ007834
N
1.000
AGAP006733
Anopheles gambiae
AGAP006733
N
0.929
BGIBMGA005323
Bombyx mori
BGIBMGA005323
N
0.857
amel4_ncbi_hmm10980
Apis mellifera
amel4_ncbi_hmm10980
N
0.857
PASA_GEN_1400063
Daphnia pulex
PASA_GEN_1400063
N
0.843
AAH92013
Xenopus laevis
AAH92013
N
0.829
THOC4
Pteropus vampyrus
ENSPVAG00000017866
N
0.829
Q58EA2
Xenopus laevis
Q58EA2
N
0.829
THOC4
Tetraodon nigroviridis
ENSTNIG00000011595
N
0.829
THOC4
Pan troglodytes
ENSPTRG00000009774
N
0.829
THOC4
Canis familiaris
ENSCAFG00000005877
N
0.829
THOC4
Otolemur garnettii
ENSOGAG00000012409
N
0.829
thoc4
Xenopus tropicalis
ENSXETG00000005391
N
0.829
Thoc4
Mus musculus
ENSMUSG00000025134
N
0.829
THOC4
Macaca mulatta
ENSMMUG00000012884
N
0.829
THOC4_BOVIN
Bos taurus
ENSBTAG00000008498
N
0.829
Ame_R000656
Ailuropoda melanoleuca
Ame_R000656
N
0.829
THOC4
Tursiops truncatus
ENSTTRG00000012275
N
0.829
THOC4
Monodelphis domestica
ENSMODG00000003030
N
0.829
THOC4
Anolis carolinensis
ENSACAG00000010526
N
0.829
THOC4
Echinops telfairi
ENSETEG00000016596
N
0.829
THOC4
Homo sapiens
ENSG00000183684
N
0.829
Thoc4
Rattus norvegicus
ENSRNOG00000036687
N
0.829
ENSTBEG00000005834
Tupaia belangeri
ENSTBEG00000005834
N
0.829
LOC100055097
Equus caballus
ENSECAG00000018754
N
0.829
THOC4
Cavia porcellus
ENSCPOG00000013710
N
0.829
tho4
Danio rerio
ENSDARG00000077732
N
0.829
THOC4
Oryzias latipes
ENSORLG00000012331
N
0.829
THOC4
Gallus gallus
ENSGALG00000007237
N
0.829
THOC4
Microcebus murinus
ENSMICG00000017403
N
0.829
ENSPPYG00000008749
Pongo pygmaeus
ENSPPYG00000008749
N
0.829
THOC4
Loxodonta africana
ENSLAFG00000003083
N
0.829
ENSMGAG00000005389
Meleagris gallopavo
ENSMGAG00000005389
N
0.829
THOC4
Gorilla gorilla
ENSGGOG00000013935
N
0.829
THOC4
Gasterosteus aculeatus
ENSGACG00000013328
N
0.814
Refbp2
Mus musculus
ENSMUSG00000060244
N
0.814
Q6GLW1
Xenopus laevis
Q6GLW1
N
0.814
AAH74336
Xenopus laevis
AAH74336
N
0.814
ENSTRUG00000003051
Takifugu rubripes
ENSTRUG00000003051
N
0.800
e_gw.5.817.1
Branchiostoma floridae
e_gw.5.817.1
N
0.800
nasonia_NCBI_hmm488134
Nasonia vitripennis
nasonia_NCBI_hmm488134
N
0.800
e_gw.394.68.1
Branchiostoma floridae
e_gw.394.68.1
N
0.800
XP_782040.2
Strongylocentrotus purpuratus
XP_782040.2
N
0.800
PHUM023420
Pediculus humanus
PHUM023420
N
0.800
XP_001185635.1
Strongylocentrotus purpuratus
XP_001185635.1
N
0.800
ISCW001860
Ixodes scapularis
ISCW001860
N
0.800
aly
Drosophila yakuba
FBgn0068000
N
0.786
GL12678
Drosophila persimilis
FBgn0150284
N
0.786
GG10124
Drosophila erecta
FBgn0102435
N
0.786
GA10707-RA
Drosophila pseudoobscura
FBgn0070763
N
0.786
Aly
Drosophila melanogaster
FBgn0010774
N
0.786
GD19510
Drosophila simulans
FBgn0191006
N
0.786
GM10513
Drosophila sechellia
FBgn0165460
N
0.786
THOC4
Erinaceus europaeus
ENSEEUG00000010164
N
0.771
GF17326
Drosophila ananassae
FBgn0094344
N
0.771
GH18594
Drosophila grimshawi
FBgn0126061
N
0.771
GI23076
Drosophila mojavensis
FBgn0145803
N
0.771
ENSGACG00000018178
Gasterosteus aculeatus
ENSGACG00000018178
N
0.771
GJ22697
Drosophila virilis
FBgn0209801
N
0.771
THOC4
Takifugu rubripes
ENSTRUG00000008828
N
0.771
GK12741
Drosophila willistoni
FBgn0214750
N
0.771
ENSMLUG00000009555
Myotis lucifugus
ENSMLUG00000009555
N
0.771
ENSCJAG00000021543
Callithrix jacchus
ENSCJAG00000021543
N
0.757
ENSTNIG00000014136
Tetraodon nigroviridis
ENSTNIG00000014136
N
0.757
Smp_108820
Schistosoma mansoni
Smp_108820
N
0.729
ENSMLUG00000007513
Myotis lucifugus
ENSMLUG00000007513
N
0.729
Aqu1.225634
Amphimedon queenslandica
Aqu1.225634
N
0.714
ENSMLUG00000015043
Myotis lucifugus
ENSMLUG00000015043
N
0.714
ENSMLUG00000002626
Myotis lucifugus
ENSMLUG00000002626
N
0.714
ENSMLUG00000016194
Myotis lucifugus
ENSMLUG00000016194
N
0.714
ENSMLUG00000010127
Myotis lucifugus
ENSMLUG00000010127
N
0.714
estExt_Genewise1.C_7200001
Capitella teleta
estExt_Genewise1.C_7200001
N
0.714
DGIL_AUG5s14095g4t3
Acyrtosiphon pisum
DGIL_AUG5s14095g4t3
N
0.700
ENSORLG00000001620
Oryzias latipes
ENSORLG00000001620
N
0.700
ENSMLUG00000004521
Myotis lucifugus
ENSMLUG00000004521
N
0.700
ENSMLUG00000004992
Myotis lucifugus
ENSMLUG00000004992
N
0.700
ENSMLUG00000002669
Myotis lucifugus
ENSMLUG00000002669
N
0.700
ENSMLUG00000001244
Myotis lucifugus
ENSMLUG00000001244
N
0.700
ENSCING00000013568
Ciona intestinalis
ENSCING00000013568
N
0.700
ENSMLUG00000001217
Myotis lucifugus
ENSMLUG00000001217
N
0.700
ENSMLUG00000007617
Myotis lucifugus
ENSMLUG00000007617
N
0.700
ENSMLUG00000007634
Myotis lucifugus
ENSMLUG00000007634
N
0.700
ENSMLUG00000013041
Myotis lucifugus
ENSMLUG00000013041
N
0.700
ENSMLUG00000013085
Myotis lucifugus
ENSMLUG00000013085
N
0.700
ENSMLUG00000011599
Myotis lucifugus
ENSMLUG00000011599
N
0.700
ENSMLUG00000011212
Myotis lucifugus
ENSMLUG00000011212
N
0.700
ENSMLUG00000008923
Myotis lucifugus
ENSMLUG00000008923
N
0.700
ENSMLUG00000009822
Myotis lucifugus
ENSMLUG00000009822
N
0.700
Gm5699
Mus musculus
ENSMUSG00000087346
N
0.700