CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
nasonia_NCBI_hmm190284
(
Nasonia vitripennis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
nasonia_NCBI_hmm190284
T32163_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm190284
RRM
300
369
FCTQVPLGMRFEEFARIFAIFGPLDHITFVLHKNQEPGTPLRKYLAFVQYFEKEDTKKAKDHCSERFKQR
Links
Other
RRM
family RBPs
Other
Nasonia vitripennis
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm106174
Nasonia vitripennis
nasonia_NCBI_hmm106174
N
0.843
nasonia_NCBI_hmm270874
Nasonia vitripennis
nasonia_NCBI_hmm270874
N
0.829
nasonia_NCBI_hmm46964
Nasonia vitripennis
nasonia_NCBI_hmm46964
N
0.814
nasonia_NCBI_hmm146224
Nasonia vitripennis
nasonia_NCBI_hmm146224
N
0.814
nasonia_NCBI_hmm222254
Nasonia vitripennis
nasonia_NCBI_hmm222254
N
0.814
nasonia_NCBI_hmm152214
Nasonia vitripennis
nasonia_NCBI_hmm152214
N
0.814
nasonia_NCBI_hmm327124
Nasonia vitripennis
nasonia_NCBI_hmm327124
N
0.786
nasonia_NCBI_hmm220044
Nasonia vitripennis
nasonia_NCBI_hmm220044
N
0.786
nasonia_NCBI_hmm224094
Nasonia vitripennis
nasonia_NCBI_hmm224094
N
0.786
nasonia_NCBI_hmm289284
Nasonia vitripennis
nasonia_NCBI_hmm289284
N
0.757
nasonia_NCBI_hmm228254
Nasonia vitripennis
nasonia_NCBI_hmm228254
N
0.757
nasonia_NCBI_hmm132364
Nasonia vitripennis
nasonia_NCBI_hmm132364
N
0.750
nasonia_NCBI_hmm223144
Nasonia vitripennis
nasonia_NCBI_hmm223144
N
0.712