CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
nasonia_NCBI_hmm222254
(
Nasonia vitripennis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
nasonia_NCBI_hmm222254
T32171_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm222254
RRM
64
133
FCAQIPLDMKFEEFTRIFGTFGPLYHITFVLHKNQEPGTPLRKYLAFVQYFEKEHAKKAIDHYIERFKQR
Links
Other
RRM
family RBPs
Other
Nasonia vitripennis
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm106174
Nasonia vitripennis
nasonia_NCBI_hmm106174
N
0.843
nasonia_NCBI_hmm270874
Nasonia vitripennis
nasonia_NCBI_hmm270874
N
0.843
nasonia_NCBI_hmm228254
Nasonia vitripennis
nasonia_NCBI_hmm228254
N
0.843
nasonia_NCBI_hmm152214
Nasonia vitripennis
nasonia_NCBI_hmm152214
N
0.814
nasonia_NCBI_hmm190284
Nasonia vitripennis
nasonia_NCBI_hmm190284
N
0.814
nasonia_NCBI_hmm46964
Nasonia vitripennis
nasonia_NCBI_hmm46964
N
0.814
nasonia_NCBI_hmm146224
Nasonia vitripennis
nasonia_NCBI_hmm146224
N
0.743
nasonia_NCBI_hmm224094
Nasonia vitripennis
nasonia_NCBI_hmm224094
N
0.729
nasonia_NCBI_hmm327124
Nasonia vitripennis
nasonia_NCBI_hmm327124
N
0.729
nasonia_NCBI_hmm220044
Nasonia vitripennis
nasonia_NCBI_hmm220044
N
0.714
nasonia_NCBI_hmm132364
Nasonia vitripennis
nasonia_NCBI_hmm132364
N
0.708
nasonia_NCBI_hmm289284
Nasonia vitripennis
nasonia_NCBI_hmm289284
N
0.700