CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
nasonia_NCBI_hmm279264
(
Nasonia vitripennis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
nasonia_NCBI_hmm279264
T32195_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
nasonia_NCBI_hmm279264
RRM
104
155
KDESFFKHFAEFGKMVYYETIRDKKGCLSYGYVQYFEESDAERARKNSDPRY
Links
Other
RRM
family RBPs
Other
Nasonia vitripennis
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
nasonia_NCBI_hmm141274
Nasonia vitripennis
nasonia_NCBI_hmm141274
N
0.904
nasonia_NCBI_hmm442714
Nasonia vitripennis
nasonia_NCBI_hmm442714
N
0.885
nasonia_NCBI_hmm20434
Nasonia vitripennis
nasonia_NCBI_hmm20434
N
0.885
nasonia_NCBI_hmm128374
Nasonia vitripennis
nasonia_NCBI_hmm128374
N
0.885
nasonia_NCBI_hmm271084
Nasonia vitripennis
nasonia_NCBI_hmm271084
N
0.868
nasonia_NCBI_hmm197004
Nasonia vitripennis
nasonia_NCBI_hmm197004
N
0.836
nasonia_NCBI_hmm322654
Nasonia vitripennis
nasonia_NCBI_hmm322654
N
0.827
nasonia_NCBI_hmm142714
Nasonia vitripennis
nasonia_NCBI_hmm142714
N
0.792
nasonia_NCBI_hmm220254
Nasonia vitripennis
nasonia_NCBI_hmm220254
N
0.774
nasonia_NCBI_hmm58274
Nasonia vitripennis
nasonia_NCBI_hmm58274
N
0.712