BGIOSIBCE002155 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE002155 T32870_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE002155 RRM 280 343

Links

Other RRM family RBPs
Other Oryza indica RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g34190 Oryza sativa LOC_Os01g34190 N 1.000
GRMZM2G145034 Zea mays GRMZM2G145034 N 0.891
SB10G003990 Sorghum bicolor Sb10g003990 N 0.875
GRMZM2G003527 Zea mays GRMZM2G003527 N 0.812
PDK_20s1603131g002 Phoenix dactylifera PDK_20s1603131g002 N 0.766
MDP0000162585 Malus x domestica MDP0000162585 N 0.766
B9GGD6_POPTR Populus trichocarpa POPTR_0001s38150 N 0.766
ppa007087m Prunus persica ppa007087m N 0.750
estExt_fgenesh1_pg.C_2810007 Physcomitrella patens estExt_fgenesh1_pg.C_2810007 N 0.750
cassava31871.valid.m1 Manihot esculenta cassava31871.valid.m1 N 0.750
chr4.CM0229.230.nc Lotus japonicus chr4.CM0229.230.nc N 0.750
mgf008467m Mimulus guttatus mgf008467m N 0.734
Cucsa.048210 Cucumis sativus Cucsa.048210 N 0.734
GSVIVG00021628001 Vitis vinifera GSVIVG00021628001 N 0.734
e_gw1.6.664.1 Selaginella moellendorfii e_gw1.6.664.1 N 0.719
30075.m001186 Ricinus communis 30075.m001186 N 0.719
PK13606.1 Cannabis sativa PK13606.1 N 0.719
Glyma20g02910.1 Glycine max Glyma20g02910.1 N 0.719
Glyma07g35050.1 Glycine max Glyma07g35050.1 N 0.703
cassava24157.valid.m1 Manihot esculenta cassava24157.valid.m1 N 0.703
Medtr4g115110 Medicago truncatula Medtr4g115110 N 0.703