BGIOSIBCE006342 (Oryza indica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 BGIOSIBCE006342 T32901_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
BGIOSIBCE006342 RRM 63 133

Links

Other RRM family RBPs
Other Oryza indica RBPs

23 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os02g15310 Oryza sativa LOC_Os02g15310 N 1.000
LOC_Os12g38430 Oryza sativa LOC_Os12g38430 N 0.958
BRADI4G03940 Brachypodium distachyon BRADI4G03940 N 0.958
SB0514S002010 Sorghum bicolor Sb0514s002010 N 0.915
PDK_20s1460721g001 Phoenix dactylifera PDK_20s1460721g001 N 0.873
Glyma02g41510.1 Glycine max Glyma02g41510.1 N 0.859
Glyma14g07440.1 Glycine max Glyma14g07440.1 N 0.859
GSVIVG00016562001 Vitis vinifera GSVIVG00016562001 N 0.859
SB05G027700 Sorghum bicolor Sb05g027700 N 0.859
chr2.CM0405.110.nd Lotus japonicus chr2.CM0405.110.nd N 0.859
Cucsa.165410 Cucumis sativus Cucsa.165410 N 0.817
XM_002876258.1 Arabidopsis lyrata fgenesh2_kg.5__1965__AT3G55460.1 N 0.803
Medtr5g087290 Medicago truncatula Medtr5g087290 N 0.789
cassava13783.valid.m1 Manihot esculenta cassava13783.valid.m1 N 0.789
At-SCL30 Arabidopsis thaliana AT3G55460-TAIR-G N 0.775
ppa010993m Prunus persica ppa010993m N 0.775
27383.m000159 Ricinus communis 27383.m000159 N 0.775
MDP0000293285 Malus x domestica MDP0000293285 N 0.761
MDP0000284128 Malus x domestica MDP0000284128 N 0.746
B9HTI2_POPTR Populus trichocarpa POPTR_0010s21070 N 0.746
GSVIVG00022010001 Vitis vinifera GSVIVG00022010001 N 0.704
B9HMI6_POPTR Populus trichocarpa POPTR_0008s05670 N 0.704
LOC_Os11g47830 Oryza sativa LOC_Os11g47830 N 0.704