An12g04760 (Aspergillus niger)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 CADANGAG00009919 T33571_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
CADANGAP00009728 RRM 9 79

Links

Other RRM family RBPs
Other Aspergillus niger RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ACLA_080910 Aspergillus clavatus CADACLAG00007889 N 1.000
fgenesh1_pm.00772_#_139 Aspergillus carbonarius fgenesh1_pm.00772_#_139 N 1.000
ANIA_06074 Aspergillus nidulans CADANIAG00006943 N 0.986
HCAG_03684 Histoplasma capsulatum HCAG_03684 N 0.986
PABG_01625 Paracoccidioides brasiliensis PABG_01625 N 0.986
PMAA_029040 Penicillium marneffei PMAA_029040 N 0.986
BDBG_05461 Blastomyces dermatitidis BDBG_05461 N 0.986
AO090011000789 Aspergillus oryzae CADAORAG00005493 N 0.986
NFIA_084630 Neosartorya fischeri CADNFIAG00006736 N 0.986
AFUA_2G09100 Aspergillus fumigatus CADAFUAG00003903 N 0.986
AFLA_045910 Aspergillus flavus CADAFLAG00005918 N 0.986
CPSG_02191 Coccidioides posadasii CPSG_02191 N 0.972
CIMG_01023 Coccidioides immitis CIMG_01023 N 0.972
UREG_00968 Uncinocarpus reesii UREG_00968 N 0.972
MCYG_04687 Microsporum canis MCYG_04687 N 0.958
MGYG_02023 Microsporum gypseum MGYG_02023 N 0.958
Pc16g10490 Penicillium chrysogenum Pc16g10490 N 0.958
TERG_03290 Trichophyton rubrum TERG_03290 N 0.958
TEQG_02465 Trichophyton equinum TEQG_02465 N 0.958
TESG_02820 Trichophyton tonsurans TESG_02820 N 0.958
TRV_01453 Trichophyton verrucosum TRV_01453 N 0.831
ARB_05046 Arthroderma benhamiae ARB_05046 N 0.831
FOXG_00686 Fusarium oxysporum FOXG_00686 N 0.718
FVEG_00825 Fusarium verticillioides FVEG_00825 N 0.718
fgenesh1_pg.sca_1_chr1_3_0000632 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000632 N 0.704
estExt_Genewise1Plus.C_20994 Myceliophthora thermophila estExt_Genewise1Plus.C_20994 N 0.704
BC1G_15665 Botrytis cinerea BC1G_15665 N 0.704
CHGG_01583 Chaetomium globosum CHGG_01583 N 0.704
GLRG_10397 Colletotrichum graminicola GLRG_10397 N 0.704
SS1G_09907 Sclerotinia sclerotiorum SS1G_09907 N 0.704