CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE12048
(
Caenorhabditis remanei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CRE12048
T34402_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE12048
RRM
44
113
IFVGNVDYGATAEELEQHFNGCGVIVRTTIPKDKMTKRQKNFAYVEFECAASVESAIVMNSSTFRGRQIV
Links
Other
RRM
family RBPs
Other
Caenorhabditis remanei
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE30214
Caenorhabditis remanei
CRE30214
N
0.845
CRE30216
Caenorhabditis remanei
CRE30216
N
0.814
CRE30215
Caenorhabditis remanei
CRE30215
N
0.814
CRE01432
Caenorhabditis remanei
CRE01432
N
0.757
CRE30229
Caenorhabditis remanei
CRE30229
N
0.757
CRE30217
Caenorhabditis remanei
CRE30217
N
0.757
CRE30220
Caenorhabditis remanei
CRE30220
N
0.729
CBG05418
Caenorhabditis briggsae
CBG05418
N
0.714