CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CRE15246
(
Caenorhabditis remanei
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CRE15246
T34417_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE15246
RRM
31
100
IFVGGISPEVNNEDLSSHFTQYGEVSQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVE
CRE15246
RRM
112
181
VFVGGLPSDYSEQELRSHFEQFGKVDDIEWPFDKQTKTRRNFAFIVFEEEESADKASSQTKQTFGTRECD
Links
Other
RRM
family RBPs
Other
Caenorhabditis remanei
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CRE16899
Caenorhabditis remanei
CRE16899
N
0.993
sqd-1
Caenorhabditis elegans
Y73B6BL.6
N
0.979
CBG05471
Caenorhabditis briggsae
CBG05471
N
0.957
Ppa-sqd-1
Pristionchus pacificus
PPA06391
N
0.786
WUBG_09430
Wuchereria bancrofti
WUBG_09430
N
0.764
Bm1_31255
Brugia malayi
Bm1_31255
N
0.764
LOAG_00763
Loa loa
LOAG_00763
N
0.764