TIA1 (Choloepus hoffmanni)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCHOG00000003904 T35267_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
TIA1
M156_0.6 		Homo sapiens WUUUUUB RNAcompete
Ray et al.(2013)
RNCMPT00165 		0.712
TIA1
M075_0.6 		Homo sapiens UUUUUBK RNAcompete
Ray et al.(2013)
RNCMPT00077 		0.712
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000003457 RRM 9 77
ENSCHOP00000003457 RRM 108 137
ENSCHOP00000003457 RRM 218 273

Links

Other RRM family RBPs
Other Choloepus hoffmanni RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSTBEG00000017228 Tupaia belangeri ENSTBEG00000017228 I 0.741
TIA1 Equus caballus ENSECAG00000022361 I 0.737
TIA1 Taeniopygia guttata ENSTGUG00000017307 I 0.724
TIA1 Pteropus vampyrus ENSPVAG00000004846 I 0.706
ENSACAG00000009648 Anolis carolinensis ENSACAG00000009648 I 0.702
Q0VBZ6_BOVIN Bos taurus ENSBTAG00000019182 I 0.702
TIA1 Tursiops truncatus ENSTTRG00000001195 I 0.702
TIA1 Loxodonta africana ENSLAFG00000003463 I 0.702
TIA1 Monodelphis domestica ENSMODG00000011515 I 0.702
Tia1 Mus musculus ENSMUSG00000071337 I 0.702