ENSCING00000011362 (Ciona intestinalis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCING00000011362 T35429_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000014783 RRM 4 66
ENSCINP00000014783 RRM 112 177

Links

Other RRM family RBPs
Other Ciona intestinalis RBPs

28 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF4 Tetraodon nigroviridis ENSTNIG00000000115 I 0.729
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.729
SRSF4 Tetraodon nigroviridis ENSTNIG00000005573 I 0.729
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.729
SRSF4 Takifugu rubripes ENSTRUG00000011891 I 0.729
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.721
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.721
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.721
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.721
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.721
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.721
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.721
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.721
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.721
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.721
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.721
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.721
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.721
SRSF4 Homo sapiens ENSG00000116350 I 0.721
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.721
Srsf4 Mus musculus ENSMUSG00000028911 I 0.721
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.721
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.721
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.721
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.721
SRSF4 Ochotona princeps ENSOPRG00000010098 I 0.713
SRSF4 Tarsius syrichta ENSTSYG00000007903 I 0.713
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.705