CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSCJAG00000004340
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000004340
T35507_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000007841
RRM
132
207
VYVSSLPSGITVDEFIQLMSKVGIIMRDPEEFKVKLYKDNPGNLKGVCLCCYLKSESVKLALKLLDEDEIRGHKLH
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HTATSF1
Procavia capensis
ENSPCAG00000010576
N
0.846
HTATSF1
Homo sapiens
ENSG00000102241
N
0.846
HTATSF1
Erinaceus europaeus
ENSEEUG00000010668
N
0.846
ENSMODG00000000199
Monodelphis domestica
ENSMODG00000000199
N
0.744