ENSCJAG00000013830 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000013830 T35603_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPA1
M312_0.6 		Homo sapiens Sequence logo not available UAGGGW RIP-chip
Cook et al.(2011)
560_17925491 		0.702
HNRNPA1
M271_0.6 		Homo sapiens UAGGGW SELEX
Cook et al.(2011)
23_7510636 		0.702
HNRNPA1
M022_0.6 		Homo sapiens DUAGGGW RNAcompete
Ray et al.(2013)
RNCMPT00022 		0.702
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000025429 RRM 16 85
ENSCJAP00000025429 RRM 107 139

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

51 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSOANG00000013708 Ornithorhynchus anatinus ENSOANG00000013708 N 0.833
HNRNPA3 Erinaceus europaeus ENSEEUG00000006347 N 0.779
ENSGGOG00000025381 Gorilla gorilla ENSGGOG00000025381 I 0.721
ROA1_PANTR Pan troglodytes ENSPTRG00000005035 I 0.714
ROA1_PANTR Pan troglodytes ENSPTRG00000028756 I 0.714
ENSOCUG00000022568 Oryctolagus cuniculus ENSOCUG00000022568 I 0.714
ENSOCUG00000013350 Oryctolagus cuniculus ENSOCUG00000013350 I 0.714
LOC100397230 Callithrix jacchus ENSCJAG00000018864 I 0.714
ROA1_PANTR Pan troglodytes ENSPTRG00000031363 I 0.714
ENSOCUG00000023674 Oryctolagus cuniculus ENSOCUG00000023674 I 0.714
ENSPVAG00000000322 Pteropus vampyrus ENSPVAG00000000322 I 0.714
Ame_R011792 Ailuropoda melanoleuca Ame_R011792 I 0.714
ROA1_BOVIN Bos taurus ENSBTAG00000001553 I 0.714
XM_534786.2 Canis familiaris ENSCAFG00000006580 I 0.714
ENSTTRG00000004505 Tursiops truncatus ENSTTRG00000004505 I 0.714
ENSTBEG00000008238 Tupaia belangeri ENSTBEG00000008238 I 0.714
Hnrnpa1 Mus musculus ENSMUSG00000046434 I 0.714
Hnrnpa1 Rattus norvegicus ENSRNOG00000036839 I 0.714
ENSSSCG00000000288 Sus scrofa ENSSSCG00000000288 I 0.714
HNRNPA1L2 Pan troglodytes ENSPTRG00000032520 I 0.714
ENSOCUG00000021007 Oryctolagus cuniculus ENSOCUG00000021007 I 0.714
ENSEEUG00000006130 Erinaceus europaeus ENSEEUG00000006130 I 0.714
ENSFCAG00000010150 Felis catus ENSFCAG00000010150 I 0.714
HNRNPA1 Homo sapiens ENSG00000135486 D 0.714
Q6DTK6_HORSE Equus caballus ENSECAG00000008676 I 0.714
ENSDNOG00000009228 Dasypus novemcinctus ENSDNOG00000009228 I 0.714
ENSCJAG00000019479 Callithrix jacchus ENSCJAG00000019479 I 0.714
ENSCJAG00000033856 Callithrix jacchus ENSCJAG00000033856 I 0.714
ENSG00000215492 Homo sapiens ENSG00000215492 I 0.714
HNRNPA1 Gorilla gorilla ENSGGOG00000003040 I 0.714
ENSMLUG00000000648 Myotis lucifugus ENSMLUG00000000648 I 0.714
ENSMLUG00000003232 Myotis lucifugus ENSMLUG00000003232 I 0.714
LOC710473 Macaca mulatta ENSMMUG00000012989 I 0.714
ENSOCUG00000023322 Oryctolagus cuniculus ENSOCUG00000023322 I 0.707
LOC710473 Macaca mulatta ENSMMUG00000029402 I 0.707
ENSCAFG00000010153 Canis familiaris ENSCAFG00000010153 I 0.707
LOC710473 Macaca mulatta ENSMMUG00000007887 I 0.707
ENSOCUG00000023444 Oryctolagus cuniculus ENSOCUG00000023444 I 0.707
ENSOGAG00000009945 Otolemur garnettii ENSOGAG00000009945 I 0.707
ENSOPRG00000006107 Ochotona princeps ENSOPRG00000006107 I 0.707
ENSLAFG00000029587 Loxodonta africana ENSLAFG00000029587 I 0.707
LOC100397230 Callithrix jacchus ENSCJAG00000004031 I 0.707
LOC100410389 Callithrix jacchus ENSCJAG00000023392 I 0.700
LOC100409067 Callithrix jacchus ENSCJAG00000003245 I 0.700
ENSACAG00000007169 Anolis carolinensis ENSACAG00000007169 I 0.700
ENSRNOG00000039436 Rattus norvegicus ENSRNOG00000039436 I 0.700
ENSLAFG00000026657 Loxodonta africana ENSLAFG00000026657 I 0.700
ROA1_MACMU Macaca mulatta ENSMMUG00000031613 I 0.700
D4A491_RAT Rattus norvegicus ENSRNOG00000029531 I 0.700
ENSOCUG00000028124 Oryctolagus cuniculus ENSOCUG00000028124 I 0.700
ENSOCUG00000010985 Oryctolagus cuniculus ENSOCUG00000010985 I 0.700