CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSOANG00000013708
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000013708
T39555_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000021620
RRM
11
80
LFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVE
ENSOANP00000021620
RRM
102
128
IFVGGIKEDTEEHHLRDYFEQYGKIES
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPA3
Erinaceus europaeus
ENSEEUG00000006347
N
0.835
ENSCJAG00000013830
Callithrix jacchus
ENSCJAG00000013830
I
0.833
HNRNPA2B1
Erinaceus europaeus
ENSEEUG00000014880
N
0.735
Hnrnpa1
Dipodomys ordii
ENSDORG00000010628
I
0.733
ENSSARG00000008946
Sorex araneus
ENSSARG00000008946
I
0.733