CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
HNRNPA3
(
Callithrix jacchus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCJAG00000032542
T35717_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000049859
RRM
1
40
MRDPQSKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVE
ENSCJAP00000049859
RRM
62
126
IFVGGIKEDTEEYNLRDYFEKYGKIEAIEAGEDLLLQLFVTFDDHDIVDKIVVQKYHTINGHNCE
Links
Other
RRM
family RBPs
Other
Callithrix jacchus
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSPPYG00000013564
Pongo pygmaeus
ENSPPYG00000013564
N
0.739
HNRNPA3
Monodelphis domestica
ENSMODG00000019803
I
0.723
HNRNPA3
Gasterosteus aculeatus
ENSGACG00000004477
I
0.714
ENSCAFG00000002024
Canis familiaris
ENSCAFG00000002024
N
0.705