CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf156
(
Cavia porcellus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSCPOG00000001500
T35749_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000001356
RRM
21
90
AFVRKIPWTAASNELREYFAQFGHIRKCTVPFDRRTGFHRGLGWVQFSSEEELQNAIQYENHIIDGVKVH
Links
Other
RRM
family RBPs
Other
Cavia porcellus
RBPs
19 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
C14orf156
Oryctolagus cuniculus
ENSOCUG00000009713
N
0.857
C14orf156
Spermophilus tridecemlineatus
ENSSTOG00000003274
N
0.843
C14orf156
Vicugna pacos
ENSVPAG00000001781
N
0.843
LOC100052429
Equus caballus
ENSECAG00000000712
N
0.829
C14orf156
Canis familiaris
ENSCAFG00000017230
N
0.829
Ame_R014974
Ailuropoda melanoleuca
Ame_R014974
N
0.829
LOC100405163
Callithrix jacchus
ENSCJAG00000016946
N
0.814
C14orf156
Ochotona princeps
ENSOPRG00000007560
N
0.814
1810035L17Rik
Mus musculus
ENSMUSG00000021040
N
0.814
LOC688717
Rattus norvegicus
ENSRNOG00000012314
N
0.800
C14orf156
Otolemur garnettii
ENSOGAG00000006933
N
0.800
SLIRP_BOVIN
Bos taurus
ENSBTAG00000008135
N
0.800
C14orf156
Homo sapiens
ENSG00000119705
N
0.771
C14orf156
Gorilla gorilla
ENSGGOG00000011059
N
0.771
C14orf156
Microcebus murinus
ENSMICG00000012080
N
0.771
C14orf156
Pan troglodytes
ENSPTRG00000030691
N
0.771
ENSPPYG00000006030
Pongo pygmaeus
ENSPPYG00000006030
N
0.743
C14orf156
Tupaia belangeri
ENSTBEG00000013979
N
0.740
C14orf156
Echinops telfairi
ENSETEG00000010345
N
0.714