CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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C14orf156
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000007257
T36787_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000006612
RRM
12
81
AFIRGIPWTVSAGELRQHFAQFGHIRRCNLPFDKDTGFHRGLGWVQFSSEEELNNVLQHDKHVIDGVKLM
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
13 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100052429
Equus caballus
ENSECAG00000000712
N
0.729
LOC100405163
Callithrix jacchus
ENSCJAG00000016946
N
0.714
1810035L17Rik
Mus musculus
ENSMUSG00000021040
N
0.714
C14orf156
Microcebus murinus
ENSMICG00000012080
N
0.714
Ame_R014974
Ailuropoda melanoleuca
Ame_R014974
N
0.700
C14orf156
Canis familiaris
ENSCAFG00000017230
N
0.700
C14orf156
Vicugna pacos
ENSVPAG00000001781
N
0.700
C14orf156
Pan troglodytes
ENSPTRG00000030691
N
0.700
C14orf156
Gorilla gorilla
ENSGGOG00000011059
N
0.700
C14orf156
Oryctolagus cuniculus
ENSOCUG00000009713
N
0.700
C14orf156
Otolemur garnettii
ENSOGAG00000006933
N
0.700
C14orf156
Homo sapiens
ENSG00000119705
N
0.700
LOC688717
Rattus norvegicus
ENSRNOG00000012314
N
0.700