CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
SRSF6
(
Felis catus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSFCAG00000013915
T37138_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000012905
RRM
4
26
VYIGRLSYNVREKDIQRFFSGXX
ENSFCAP00000012905
RRM
112
177
LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR
Links
Other
RRM
family RBPs
Other
Felis catus
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF6
Vicugna pacos
ENSVPAG00000003016
N
0.926
SRSF6
Choloepus hoffmanni
ENSCHOG00000000561
N
0.845
SRSF6
Otolemur garnettii
ENSOGAG00000014468
N
0.845
SRSF6_RABIT
Oryctolagus cuniculus
ENSOCUG00000009785
N
0.829
SRSF6
Macaca mulatta
ENSMMUG00000006742
N
0.821
SRSF6
Sus scrofa
ENSSSCG00000007362
N
0.813
SRSF6
Gallus gallus
ENSGALG00000000990
N
0.802
Ame_R005284
Ailuropoda melanoleuca
Ame_R005284
N
0.791
SRSF4
Echinops telfairi
ENSETEG00000009774
N
0.728