CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
ENSGACG00000015206
(
Gasterosteus aculeatus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSGACG00000015206
T37528_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000020054
RRM
7
77
LFIGGLSFETNEDSLGEAFGKYGSIEKVDVIRDKETGKSRGFGFVKFDNSEDAKDALEAMNGKTLDGRSIR
Links
Other
RRM
family RBPs
Other
Gasterosteus aculeatus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIRBP
Oryzias latipes
ENSORLG00000015433
N
0.887
CIRBP
Tetraodon nigroviridis
ENSTNIG00000000450
N
0.859
ENSGACG00000014978
Gasterosteus aculeatus
ENSGACG00000014978
N
0.859
CIRBP
Takifugu rubripes
ENSTRUG00000010187
N
0.831
cirbp
Danio rerio
ENSDARG00000013351
N
0.732