CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KIAA0430
(
Loxodonta africana
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSLAFG00000017524
T38082_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000014713
RRM
516
581
LYVYNLPANKDGKSISNRLRRLSDNCGGKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRII
ENSLAFP00000014713
RRM
795
866
IQISNIDYRLSRKELQQLMQEAFSRHGKVKSVELSPHTDYQLKAVVQMETLQEAISAVNSLHRYKIGGKKIL
ENSLAFP00000019962
RRM
504
569
LYVYNLPANKDGKSISNRLRRLSDNCGGKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRII
ENSLAFP00000019962
RRM
783
854
IQISNIDYRLSRKELQQLMQEAFSRHGKVKSVELSPHTDYQLKAVVQMETLQEAISAVNSLHRYKIGGKKIL
Links
Other
RRM
family RBPs
Other
Loxodonta africana
RBPs
31 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ame_R015631
Ailuropoda melanoleuca
Ame_R015631
N
0.986
KIAA0430
Procavia capensis
ENSPCAG00000009429
N
0.986
KIAA0430
Pteropus vampyrus
ENSPVAG00000004572
N
0.978
KIAA0430
Erinaceus europaeus
ENSEEUG00000004084
N
0.978
KIAA0430
Felis catus
ENSFCAG00000013229
N
0.978
KIAA0430
Choloepus hoffmanni
ENSCHOG00000000497
N
0.971
LOC100050501
Equus caballus
ENSECAG00000013828
N
0.971
KIAA0430
Canis familiaris
ENSCAFG00000018732
N
0.971
KIAA0430
Oryctolagus cuniculus
ENSOCUG00000003687
N
0.957
KIAA0430
Cavia porcellus
ENSCPOG00000008677
N
0.949
KIAA0430
Tursiops truncatus
ENSTTRG00000010245
N
0.949
KIAA0430
Tarsius syrichta
ENSTSYG00000013474
N
0.949
KIAA0430
Otolemur garnettii
ENSOGAG00000003694
N
0.949
KIAA0430
Myotis lucifugus
ENSMLUG00000004374
N
0.949
LOC100389469
Callithrix jacchus
ENSCJAG00000005426
N
0.935
KIAA0430
Macaca mulatta
ENSMMUG00000018035
N
0.935
KIAA0430
Homo sapiens
ENSG00000166783
N
0.935
LOC506615
Bos taurus
ENSBTAG00000020387
N
0.935
KIAA0430
Pan troglodytes
ENSPTRG00000007807
N
0.935
ENSPPYG00000007131
Pongo pygmaeus
ENSPPYG00000007131
N
0.935
KIAA0430
Gorilla gorilla
ENSGGOG00000008946
N
0.935
4921513D23Rik
Mus musculus
ENSMUSG00000060657
N
0.913
Lkap
Rattus norvegicus
ENSRNOG00000002314
N
0.913
KIAA0430
Macropus eugenii
ENSMEUG00000005341
N
0.862
KIAA0430
Meleagris gallopavo
ENSMGAG00000006956
N
0.848
KIAA0430
Gallus gallus
ENSGALG00000006475
N
0.848
KIAA0430
Taeniopygia guttata
ENSTGUG00000005331
N
0.841
KIAA0430
Anolis carolinensis
ENSACAG00000003689
N
0.841
KIAA0430
Ornithorhynchus anatinus
ENSOANG00000005140
N
0.833
KIAA0430
Vicugna pacos
ENSVPAG00000010903
N
0.775