CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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KIAA0430
(
Myotis lucifugus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMLUG00000004374
T38648_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000003985
RRM
514
579
LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSITGCSAILRFINQDSAERAQKRMENEDVFGNRII
ENSMLUP00000003985
RRM
784
855
IQISNIDYRVSRKELQQLIQEAFSRHGKVKSVELSPHTDYQLRAVVQMENLQEAISAVNTLHRYKIGSKKIL
Links
Other
RRM
family RBPs
Other
Myotis lucifugus
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LOC100050501
Equus caballus
ENSECAG00000013828
N
0.964
Ame_R015631
Ailuropoda melanoleuca
Ame_R015631
N
0.964
KIAA0430
Pteropus vampyrus
ENSPVAG00000004572
N
0.957
KIAA0430
Erinaceus europaeus
ENSEEUG00000004084
N
0.957
KIAA0430
Felis catus
ENSFCAG00000013229
N
0.957
KIAA0430
Canis familiaris
ENSCAFG00000018732
N
0.949
KIAA0430
Loxodonta africana
ENSLAFG00000017524
N
0.949
KIAA0430
Choloepus hoffmanni
ENSCHOG00000000497
N
0.949
KIAA0430
Oryctolagus cuniculus
ENSOCUG00000003687
N
0.942
KIAA0430
Cavia porcellus
ENSCPOG00000008677
N
0.935
KIAA0430
Homo sapiens
ENSG00000166783
N
0.935
KIAA0430
Macaca mulatta
ENSMMUG00000018035
N
0.935
LOC100389469
Callithrix jacchus
ENSCJAG00000005426
N
0.935
KIAA0430
Gorilla gorilla
ENSGGOG00000008946
N
0.935
KIAA0430
Pan troglodytes
ENSPTRG00000007807
N
0.935
KIAA0430
Procavia capensis
ENSPCAG00000009429
N
0.935
ENSPPYG00000007131
Pongo pygmaeus
ENSPPYG00000007131
N
0.935
KIAA0430
Tursiops truncatus
ENSTTRG00000010245
N
0.928
KIAA0430
Tarsius syrichta
ENSTSYG00000013474
N
0.920
KIAA0430
Otolemur garnettii
ENSOGAG00000003694
N
0.920
LOC506615
Bos taurus
ENSBTAG00000020387
N
0.913
Lkap
Rattus norvegicus
ENSRNOG00000002314
N
0.899
4921513D23Rik
Mus musculus
ENSMUSG00000060657
N
0.899
KIAA0430
Meleagris gallopavo
ENSMGAG00000006956
N
0.848
KIAA0430
Gallus gallus
ENSGALG00000006475
N
0.848
KIAA0430
Macropus eugenii
ENSMEUG00000005341
N
0.841
KIAA0430
Anolis carolinensis
ENSACAG00000003689
N
0.841
KIAA0430
Taeniopygia guttata
ENSTGUG00000005331
N
0.841
KIAA0430
Ornithorhynchus anatinus
ENSOANG00000005140
N
0.826
KIAA0430
Vicugna pacos
ENSVPAG00000010903
N
0.768