CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF6
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000000888
T38301_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000000267
RRM
67
132
LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIR
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF6
Ornithorhynchus anatinus
ENSOANG00000008955
N
1.000
SRSF6
Spermophilus tridecemlineatus
ENSSTOG00000010866
N
0.985
SRSF6
Tursiops truncatus
ENSTTRG00000015410
N
0.985
LOC100070669
Equus caballus
ENSECAG00000023932
N
0.985
SRSF6
Sorex araneus
ENSSARG00000001602
N
0.985
XR_023431.1
Pan troglodytes
ENSPTRG00000013506
N
0.985
SRSF6
Myotis lucifugus
ENSMLUG00000016618
N
0.985
SRSF6
Ochotona princeps
ENSOPRG00000002017
N
0.985
SRSF6
Loxodonta africana
ENSLAFG00000006682
N
0.970
SRSF4
Sorex araneus
ENSSARG00000001277
N
0.909
SRSF6
Monodelphis domestica
ENSMODG00000003107
I
0.712
SRSF6
Macaca mulatta
ENSMMUG00000006742
N
0.712