CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF4
(
Sorex araneus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSSARG00000001277
T41268_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000001165
RRM
70
135
LIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIR
Links
Other
RRM
family RBPs
Other
Sorex araneus
RBPs
10 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF6
Ornithorhynchus anatinus
ENSOANG00000008955
N
0.909
SRSF6
Meleagris gallopavo
ENSMGAG00000000888
N
0.909
SRSF6
Myotis lucifugus
ENSMLUG00000016618
N
0.894
SRSF6
Ochotona princeps
ENSOPRG00000002017
N
0.894
XR_023431.1
Pan troglodytes
ENSPTRG00000013506
N
0.894
SRSF6
Loxodonta africana
ENSLAFG00000006682
N
0.894
SRSF6
Spermophilus tridecemlineatus
ENSSTOG00000010866
N
0.894
SRSF6
Tursiops truncatus
ENSTTRG00000015410
N
0.894
LOC100070669
Equus caballus
ENSECAG00000023932
N
0.894
SRSF6
Sorex araneus
ENSSARG00000001602
N
0.894