CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDBP
(
Meleagris gallopavo
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMGAG00000001297
T38309_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000000743
RRM
240
298
GAELSPELLRSAFAPFGAIIDLSLDSPRNCAFVTYEKMESADQAMAELNGAVVQDVQLR
Links
Other
RRM
family RBPs
Other
Meleagris gallopavo
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDBP
Cavia porcellus
ENSCPOG00000023834
N
0.733
RDBP
Ornithorhynchus anatinus
ENSOANG00000009900
N
0.729
LOC100051271
Equus caballus
ENSECAG00000012274
N
0.717
RDBP
Felis catus
ENSFCAG00000004518
N
0.717
Rdbp
Dipodomys ordii
ENSDORG00000011705
N
0.717
RDBP
Dasypus novemcinctus
ENSDNOG00000009997
N
0.717
ENSDARG00000078711
Danio rerio
ENSDARG00000078711
N
0.717
RDBP
Homo sapiens
ENSG00000204356
N
0.717
AL844853.7
Homo sapiens
ENSG00000206357
N
0.717
RDBP
Gorilla gorilla
ENSGGOG00000002265
N
0.717
RDBP
Loxodonta africana
ENSLAFG00000028155
N
0.717
BX005143.2
Homo sapiens
ENSG00000233801
N
0.717
AL662849.4
Homo sapiens
ENSG00000231044
N
0.717
A6MKH3_CALJA
Callithrix jacchus
ENSCJAG00000002368
N
0.717
CR759782.5
Homo sapiens
ENSG00000229363
N
0.717
CR388219.1
Homo sapiens
ENSG00000206268
N
0.717
NELFE_BOVIN
Bos taurus
ENSBTAG00000007453
N
0.717
RDBP
Ochotona princeps
ENSOPRG00000003942
N
0.717
RDBP
Procavia capensis
ENSPCAG00000004108
N
0.717
RDBP
Oryctolagus cuniculus
ENSOCUG00000007012
N
0.717
Rdbp
Mus musculus
ENSMUSG00000024369
N
0.717
RDBP
Myotis lucifugus
ENSMLUG00000000622
N
0.717
RDBP
Macaca mulatta
ENSMMUG00000000735
N
0.717
ENSPPYG00000016471
Pongo pygmaeus
ENSPPYG00000016471
N
0.717
RDBP
Pan troglodytes
ENSPTRG00000017996
N
0.717
Ame_R018444
Ailuropoda melanoleuca
Ame_R018444
N
0.717
RDBP
Microcebus murinus
ENSMICG00000003287
N
0.717
RDBP
Tursiops truncatus
ENSTTRG00000005923
N
0.717
RDBP
Sus scrofa
ENSSSCG00000001423
N
0.717
RDBP
Pteropus vampyrus
ENSPVAG00000005135
N
0.717
Rdbp
Rattus norvegicus
ENSRNOG00000000420
N
0.717
RDBP
Canis familiaris
ENSCAFG00000000690
N
0.717