CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDBP
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000009900
T39524_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000015693
RRM
23
81
GADLTPAMLRQAFSPFANIIDLSMDPPRNCAFVTYEKMESADQAIAELNGTQVESVQLK
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
37 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
RDBP
Dasypus novemcinctus
ENSDNOG00000009997
N
0.883
CR388219.1
Homo sapiens
ENSG00000206268
N
0.867
AL844853.7
Homo sapiens
ENSG00000206357
N
0.867
CR759782.5
Homo sapiens
ENSG00000229363
N
0.867
RDBP
Homo sapiens
ENSG00000204356
N
0.867
RDBP
Felis catus
ENSFCAG00000004518
N
0.867
Rdbp
Dipodomys ordii
ENSDORG00000011705
N
0.867
LOC100051271
Equus caballus
ENSECAG00000012274
N
0.867
AL662849.4
Homo sapiens
ENSG00000231044
N
0.867
BX005143.2
Homo sapiens
ENSG00000233801
N
0.867
RDBP
Macaca mulatta
ENSMMUG00000000735
N
0.867
Rdbp
Mus musculus
ENSMUSG00000024369
N
0.867
RDBP
Myotis lucifugus
ENSMLUG00000000622
N
0.867
RDBP
Microcebus murinus
ENSMICG00000003287
N
0.867
RDBP
Gorilla gorilla
ENSGGOG00000002265
N
0.867
RDBP
Loxodonta africana
ENSLAFG00000028155
N
0.867
RDBP
Ochotona princeps
ENSOPRG00000003942
N
0.867
RDBP
Oryctolagus cuniculus
ENSOCUG00000007012
N
0.867
Rdbp
Rattus norvegicus
ENSRNOG00000000420
N
0.867
ENSDARG00000078711
Danio rerio
ENSDARG00000078711
N
0.867
RDBP
Pteropus vampyrus
ENSPVAG00000005135
N
0.867
RDBP
Pan troglodytes
ENSPTRG00000017996
N
0.867
RDBP
Procavia capensis
ENSPCAG00000004108
N
0.867
ENSPPYG00000016471
Pongo pygmaeus
ENSPPYG00000016471
N
0.867
RDBP
Tursiops truncatus
ENSTTRG00000005923
N
0.867
RDBP
Sus scrofa
ENSSSCG00000001423
N
0.867
RDBP
Canis familiaris
ENSCAFG00000000690
N
0.867
NELFE_BOVIN
Bos taurus
ENSBTAG00000007453
N
0.867
A6MKH3_CALJA
Callithrix jacchus
ENSCJAG00000002368
N
0.867
Ame_R018444
Ailuropoda melanoleuca
Ame_R018444
N
0.867
RDBP
Cavia porcellus
ENSCPOG00000023834
N
0.850
RDBP
Macropus eugenii
ENSMEUG00000006053
N
0.839
RDBP
Tarsius syrichta
ENSTSYG00000012132
N
0.833
RDBP
Monodelphis domestica
ENSMODG00000015063
N
0.823
RDBP
Sorex araneus
ENSSARG00000003684
N
0.800
RDBP
Anolis carolinensis
ENSACAG00000011678
N
0.780
RDBP
Meleagris gallopavo
ENSMGAG00000001297
N
0.729