CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSMODG00000000008
(
Monodelphis domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSMODG00000000008
T39021_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000000011
RRM
1
34
GRPSGEAFVELESKDEVKLALKRDRETMGHRYVE
ENSMODP00000000011
RRM
65
129
RGLPFGCSNEKNYFFSGLEIVSNGIALPMDFQGGVGEAFLQFASQKITEKALKKPKKRIGHSDIE
ENSMODP00000000011
RRM
216
280
VHMRGLPYQAIENDIYNFFLTTQLCVHIEIGPDGRVIGEADVEFATHKDAVAAISKDKANMQHRY
Links
Other
RRM
family RBPs
Other
Monodelphis domestica
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
HNRNPH1
Tarsius syrichta
ENSTSYG00000006417
I
0.726
LOC100067495
Equus caballus
ENSECAG00000014429
I
0.726
ENSCHOG00000003841
Choloepus hoffmanni
ENSCHOG00000003841
I
0.726
HNRNPH1
Tursiops truncatus
ENSTTRG00000000470
I
0.715
HNRNPH1
Sorex araneus
ENSSARG00000003024
I
0.715
HNRNPH1
Felis catus
ENSFCAG00000001204
I
0.712
HNRNPH1
Taeniopygia guttata
ENSTGUG00000001085
I
0.710