LOC100067495 (Equus caballus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSECAG00000014429 T36634_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
HNRNPH2
M151_0.6 		Homo sapiens GGGAGGG RNAcompete
Ray et al.(2013)
RNCMPT00160 		0.857
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000012462 RRM 8 55
ENSECAP00000012462 RRM 84 153
ENSECAP00000012462 RRM 262 329

Links

Other RRM family RBPs
Other Equus caballus RBPs

89 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSCHOG00000003841 Choloepus hoffmanni ENSCHOG00000003841 I 1.000
HNRNPH1 Tarsius syrichta ENSTSYG00000006417 I 1.000
HNRNPH1 Sorex araneus ENSSARG00000003024 I 0.989
HNRNPH1 Tursiops truncatus ENSTTRG00000000470 I 0.978
HNRNPH1 Taeniopygia guttata ENSTGUG00000001085 I 0.973
HNRNPH1 Felis catus ENSFCAG00000001204 I 0.968
HNRNPH2 Felis catus ENSFCAG00000015400 I 0.914
HNRNPH1 Echinops telfairi ENSETEG00000011303 I 0.890
HNRNPH1 Bos taurus ENSBTAG00000009389 I 0.886
HNRNPH1 Pan troglodytes ENSPTRG00000017617 I 0.886
Hnrnph1 Mus musculus ENSMUSG00000007850 I 0.886
HNRNPH1 Sus scrofa ENSSSCG00000014022 I 0.886
ENSPPYG00000016121 Pongo pygmaeus ENSPPYG00000016121 I 0.886
Hnrph1 Rattus norvegicus ENSRNOG00000003399 I 0.886
HNRNPH1 Canis familiaris ENSCAFG00000000336 I 0.886
HNRNPH1 Oryctolagus cuniculus ENSOCUG00000017150 I 0.886
Ame_R009346 Ailuropoda melanoleuca Ame_R009346 I 0.886
Hnrnph1 Dipodomys ordii ENSDORG00000005453 I 0.886
HNRNPH1 Homo sapiens ENSG00000169045 I 0.886
HNRNPH1 Cavia porcellus ENSCPOG00000001485 I 0.886
HNRNPH1 Callithrix jacchus ENSCJAG00000009931 I 0.886
HNRNPH1 Gorilla gorilla ENSGGOG00000025844 I 0.886
ENSOANG00000010222 Ornithorhynchus anatinus ENSOANG00000010222 I 0.881
HNRNPH1 Loxodonta africana ENSLAFG00000015766 I 0.881
ENSMODG00000009436 Monodelphis domestica ENSMODG00000009436 I 0.881
HNRNPH1 Vicugna pacos ENSVPAG00000007485 I 0.876
LOC100057665 Equus caballus ENSECAG00000023575 I 0.862
HNRNPH2 Ochotona princeps ENSOPRG00000007985 I 0.862
HNRNPH2 Cavia porcellus ENSCPOG00000012405 I 0.862
HNRNPH2 Echinops telfairi ENSETEG00000008416 I 0.862
HNRNPH2 Pteropus vampyrus ENSPVAG00000001571 I 0.862
HNRNPH2 Sorex araneus ENSSARG00000014182 I 0.862
ENSOCUG00000010629 Oryctolagus cuniculus ENSOCUG00000010629 I 0.862
HNRH2_BOVIN Bos taurus ENSBTAG00000007499 I 0.862
HNRNPH2 Tursiops truncatus ENSTTRG00000012786 I 0.862
HNRNPH2 Canis familiaris ENSCAFG00000017693 I 0.862
HNRNPH2 Tarsius syrichta ENSTSYG00000007811 I 0.862
ENSOCUG00000006387 Oryctolagus cuniculus ENSOCUG00000006387 I 0.862
Q5F3I8_CHICK Gallus gallus ENSGALG00000005955 I 0.862
ENSMGAG00000007328 Meleagris gallopavo ENSMGAG00000007328 I 0.862
Ame_R018226 Ailuropoda melanoleuca Ame_R018226 I 0.862
HNRNPH2 Callithrix jacchus ENSCJAG00000004908 I 0.857
Hnrnph2 Rattus norvegicus ENSRNOG00000011661 I 0.857
HNRNPH2 Pan troglodytes ENSPTRG00000022107 I 0.857
HNRNPH2 Homo sapiens ENSG00000126945 D 0.857
HNRNPH2 Gorilla gorilla ENSGGOG00000008096 I 0.857
Hnrnph2 Mus musculus ENSMUSG00000045427 I 0.857
HNRNPH2 Procavia capensis ENSPCAG00000003333 I 0.857
HNRNPH2 Macaca mulatta ENSMMUG00000019580 I 0.857
ENSPPYG00000020553 Pongo pygmaeus ENSPPYG00000020553 I 0.857
hnrnph2 Xenopus tropicalis ENSXETG00000018321 I 0.824
AAH77770 Xenopus laevis AAH77770 I 0.819
ENSACAG00000016323 Anolis carolinensis ENSACAG00000016323 I 0.819
AAI10708 Xenopus laevis AAI10708 I 0.819
hnrnph1l Danio rerio ENSDARG00000005551 I 0.814
AAH70969 Xenopus laevis AAH70969 I 0.805
HNRNPH1 Gasterosteus aculeatus ENSGACG00000018352 I 0.800
HNRNPH1 Takifugu rubripes ENSTRUG00000001031 I 0.800
HNRNPF Felis catus ENSFCAG00000006794 N 0.796
HNRNPF Sorex araneus ENSSARG00000010059 I 0.790
HNRNPF Pteropus vampyrus ENSPVAG00000011646 I 0.790
ENSDORG00000005431 Dipodomys ordii ENSDORG00000005431 I 0.786
Hnrnpf Rattus norvegicus ENSRNOG00000014562 I 0.786
HNRNPF Canis familiaris ENSCAFG00000007044 I 0.786
Ame_R005224 Ailuropoda melanoleuca Ame_R005224 I 0.786
ENSOCUG00000024719 Oryctolagus cuniculus ENSOCUG00000024719 I 0.786
HNRNPF Callithrix jacchus ENSCJAG00000016238 I 0.786
Hnrnpf Mus musculus ENSMUSG00000042079 I 0.786
HNRNPF Gorilla gorilla ENSGGOG00000010867 I 0.781
HNRNPF Cavia porcellus ENSCPOG00000003678 I 0.781
LOC100050002 Equus caballus ENSECAG00000003229 I 0.781
HNRNPF Homo sapiens ENSG00000169813 I 0.781
HNRNPF Microcebus murinus ENSMICG00000001490 I 0.781
HNRNPF Macaca mulatta ENSMMUG00000020982 I 0.781
HNRNPF Pan troglodytes ENSPTRG00000002446 I 0.781
HNRNPH1 Oryzias latipes ENSORLG00000006932 I 0.781
HNRNPF Otolemur garnettii ENSOGAG00000013734 I 0.781
ENSPPYG00000002212 Pongo pygmaeus ENSPPYG00000002212 I 0.781
HNRPF_BOVIN Bos taurus ENSBTAG00000008853 I 0.781
HNRNPF Sus scrofa ENSSSCG00000010203 I 0.781
HNRNPF Procavia capensis ENSPCAG00000013169 I 0.771
HNRNPH1 Otolemur garnettii ENSOGAG00000012631 I 0.771
HNRNPF Loxodonta africana ENSLAFG00000000424 I 0.771
ENSMICG00000014218 Microcebus murinus ENSMICG00000014218 I 0.762
ENSMMUG00000017392 Macaca mulatta ENSMMUG00000017392 I 0.752
ENSOCUG00000024604 Oryctolagus cuniculus ENSOCUG00000024604 I 0.738
ENSMODG00000000008 Monodelphis domestica ENSMODG00000000008 N 0.726
ENSRNOG00000015533 Rattus norvegicus ENSRNOG00000015533 I 0.705
HNRNPH1 Spermophilus tridecemlineatus ENSSTOG00000016376 N 0.705