CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF1
(
Otolemur garnettii
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOGAG00000011600
T39883_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000010380
RRM
18
58
MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQS
ENSOGAP00000010380
RRM
110
150
LFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRXX
ENSOGAP00000010380
RRM
403
473
LFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Otolemur garnettii
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF1
Sorex araneus
ENSSARG00000003207
N
0.836
CELF1
Erinaceus europaeus
ENSEEUG00000009782
N
0.836
CELF1
Dasypus novemcinctus
ENSDNOG00000009523
N
0.835
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.829
CELF1
Pan troglodytes
ENSPTRG00000003568
N
0.825
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.764
CELF2
Procavia capensis
ENSPCAG00000010882
N
0.758
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.736
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.733
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.724
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.722
CELF1
Equus caballus
ENSECAG00000007741
N
0.716
CELF1
Homo sapiens
ENSG00000149187
N
0.716
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.716
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.716
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.716
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.716
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.716
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.716
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.716
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.716
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.716
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.716
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.711
Celf1
Mus musculus
ENSMUSG00000005506
N
0.711
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.706
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.706
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.706
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.706
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.706