CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF2
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000010882
T40378_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000010160
RRM
36
76
MFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQS
ENSPCAP00000010160
RRM
128
196
LFIGMVSKKCNENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCS
ENSPCAP00000010160
RRM
437
507
LFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSKCFGFVSYDNPVSAQAAIQAMNGFQIGMKRLK
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
74 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CELF2
Macropus eugenii
ENSMEUG00000015276
N
0.994
CELF2
Tursiops truncatus
ENSTTRG00000014665
N
0.978
CELF1
Tupaia belangeri
ENSTBEG00000005140
N
0.901
CELF2
Anolis carolinensis
ENSACAG00000007661
N
0.849
CELF2
Loxodonta africana
ENSLAFG00000013612
N
0.849
CELF2
Erinaceus europaeus
ENSEEUG00000005658
N
0.849
Ame_R017712
Ailuropoda melanoleuca
Ame_R017712
N
0.849
CELF2
Gorilla gorilla
ENSGGOG00000009330
I
0.849
ENSPPYG00000002083
Pongo pygmaeus
ENSPPYG00000002083
N
0.849
CELF2
Homo sapiens
ENSG00000048740
N
0.849
CELF2
Equus caballus
ENSECAG00000006649
N
0.849
CELF2
Cavia porcellus
ENSCPOG00000012567
N
0.849
CELF2_CHICK
Gallus gallus
ENSGALG00000006713
N
0.849
CELF2
Macaca mulatta
ENSMMUG00000011468
N
0.849
LOC100391960
Callithrix jacchus
ENSCJAG00000020663
I
0.849
CELF2
Canis familiaris
ENSCAFG00000004973
N
0.849
CELF2
Microcebus murinus
ENSMICG00000007867
N
0.849
CELF2
Oryctolagus cuniculus
ENSOCUG00000004961
N
0.849
CUGBP2-1
Taeniopygia guttata
ENSTGUG00000002136
N
0.849
Cugbp2
Rattus norvegicus
ENSRNOG00000023661
N
0.849
CELF2
Tupaia belangeri
ENSTBEG00000007939
N
0.849
CELF2
Pan troglodytes
ENSPTRG00000002284
N
0.849
CELF2
Ochotona princeps
ENSOPRG00000011502
N
0.849
Celf2
Mus musculus
ENSMUSG00000002107
N
0.849
Q7ZXE2
Xenopus laevis
Q7ZXE2
N
0.844
celf2
Xenopus tropicalis
ENSXETG00000021992
N
0.844
AAH45035
Xenopus laevis
AAH45035
N
0.844
AAB09041
Xenopus laevis
AAB09041
N
0.844
CELF2
Takifugu rubripes
ENSTRUG00000010147
N
0.835
celf2
Danio rerio
ENSDARG00000002131
N
0.835
CELF2
Tetraodon nigroviridis
ENSTNIG00000007201
N
0.831
Q2KI16_BOVIN
Bos taurus
ENSBTAG00000008937
I
0.830
ACH69783
Xenopus laevis
ACH69783
N
0.819
CELF2
Choloepus hoffmanni
ENSCHOG00000002945
N
0.803
CELF1_CHICK
Gallus gallus
ENSGALG00000008097
N
0.788
CELF1
Anolis carolinensis
ENSACAG00000002114
N
0.788
CELF1
Meleagris gallopavo
ENSMGAG00000010629
N
0.788
CELF1
Monodelphis domestica
ENSMODG00000019913
N
0.788
CUGBP1
Taeniopygia guttata
ENSTGUG00000010377
N
0.788
CELF1
Macropus eugenii
ENSMEUG00000007763
N
0.788
CELF1
Ochotona princeps
ENSOPRG00000003239
N
0.786
CELF1
Ornithorhynchus anatinus
ENSOANG00000007896
N
0.783
CELF1
Macaca mulatta
ENSMMUG00000011657
N
0.778
CELF1
Loxodonta africana
ENSLAFG00000003484
N
0.778
CELF1
Oryctolagus cuniculus
ENSOCUG00000001311
N
0.778
CELF1
Homo sapiens
ENSG00000149187
N
0.778
CELF1
Canis familiaris
ENSCAFG00000008452
N
0.778
LOC100392717
Callithrix jacchus
ENSCJAG00000020133
N
0.778
A7MB95_BOVIN
Bos taurus
ENSBTAG00000002520
N
0.778
Ame_R009875
Ailuropoda melanoleuca
Ame_R009875
N
0.778
CELF1
Equus caballus
ENSECAG00000007741
N
0.778
CELF1
Cavia porcellus
ENSCPOG00000007871
N
0.778
CELF1
Takifugu rubripes
ENSTRUG00000001711
N
0.778
CELF1
Tursiops truncatus
ENSTTRG00000014157
N
0.778
CELF1
Vicugna pacos
ENSVPAG00000000336
N
0.778
celf1
Xenopus tropicalis
ENSXETG00000009044
N
0.774
AAC41243
Xenopus laevis
AAC41243
N
0.774
O57406
Xenopus laevis
O57406
N
0.774
AAI08575
Xenopus laevis
AAI08575
N
0.774
Cugbp1
Rattus norvegicus
ENSRNOG00000010379
N
0.769
ENSPPYG00000003302
Pongo pygmaeus
ENSPPYG00000003302
N
0.769
celf1
Danio rerio
ENSDARG00000005315
N
0.769
Celf1
Mus musculus
ENSMUSG00000005506
N
0.769
Celf1
Dipodomys ordii
ENSDORG00000013721
N
0.764
AAH57743
Xenopus laevis
AAH57743
N
0.759
AAH70706
Xenopus laevis
AAH70706
N
0.759
Q6PF35
Xenopus laevis
Q6PF35
N
0.759
CELF1
Otolemur garnettii
ENSOGAG00000011600
N
0.758
CELF2
Gasterosteus aculeatus
ENSGACG00000004426
N
0.751
CELF2
Oryzias latipes
ENSORLG00000003894
N
0.746
CELF2
Tetraodon nigroviridis
ENSTNIG00000016009
N
0.746
CELF1
Procavia capensis
ENSPCAG00000002631
N
0.745
CELF2
Takifugu rubripes
ENSTRUG00000016905
N
0.742
CELF1
Microcebus murinus
ENSMICG00000007157
N
0.736