PPARGC1A (Oryzias latipes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSORLG00000004788 T40124_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006027 RRM 715 778

Links

Other RRM family RBPs
Other Oryzias latipes RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Q3Y595_FUGRU Takifugu rubripes ENSTRUG00000007210 N 0.984
PPARGC1A Tetraodon nigroviridis ENSTNIG00000002174 N 0.969
PPARGC1A Loxodonta africana ENSLAFG00000012981 N 0.812
PPARGC1A Gorilla gorilla ENSGGOG00000009810 N 0.812
PPARGC1A Homo sapiens ENSG00000109819 N 0.812
Ppargc1a Dipodomys ordii ENSDORG00000016276 N 0.812
LOC100055716 Equus caballus ENSECAG00000009164 N 0.812
PPARGC1A Microcebus murinus ENSMICG00000015390 N 0.812
PPARGC1A Procavia capensis ENSPCAG00000016308 N 0.812
Ppargc1a Mus musculus ENSMUSG00000029167 N 0.812
PPARGC1A Ornithorhynchus anatinus ENSOANG00000006680 N 0.812
PPARGC1A Monodelphis domestica ENSMODG00000000549 N 0.812
PPARGC1A Macaca mulatta ENSMMUG00000001844 N 0.812
PPARGC1A Oryctolagus cuniculus ENSOCUG00000014668 N 0.812
PPARGC1A Myotis lucifugus ENSMLUG00000016307 N 0.812
PPARGC1A Dasypus novemcinctus ENSDNOG00000012977 N 0.812
PPARGC1A Cavia porcellus ENSCPOG00000001518 N 0.812
Ame_R008203 Ailuropoda melanoleuca Ame_R008203 N 0.812
Ppargc1a Rattus norvegicus ENSRNOG00000004473 N 0.812
PPARGC1A Tursiops truncatus ENSTTRG00000005327 N 0.812
Q6R2I4_SPETR Spermophilus tridecemlineatus ENSSTOG00000012522 N 0.812
PPARGC1A Pteropus vampyrus ENSPVAG00000004965 N 0.812
ENSPPYG00000014640 Pongo pygmaeus ENSPPYG00000014640 N 0.812
PPARGC1A Canis familiaris ENSCAFG00000016519 N 0.812
PPARGC1A Sorex araneus ENSSARG00000000575 N 0.812
PRGC1_BOVIN Bos taurus ENSBTAG00000017024 N 0.812
PPARGC1A Callithrix jacchus ENSCJAG00000013024 N 0.812
PPARGC1A Ochotona princeps ENSOPRG00000012899 N 0.797
PPARGC1A Meleagris gallopavo ENSMGAG00000012485 N 0.797
PPARGC1A Erinaceus europaeus ENSEEUG00000009219 N 0.797
PPARGC1A Vicugna pacos ENSVPAG00000003478 N 0.797
Q60GU0_CHICK Gallus gallus ENSGALG00000014398 N 0.781
D7F2U6_ANOCA Anolis carolinensis ENSACAG00000000741 N 0.766