CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF5
(
Procavia capensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPCAG00000004405
T40320_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000004093
RRM
6
68
VFIGRLNPAAREKDVERFFKGYGRIKDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVT
ENSPCAP00000004093
RRM
110
142
LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRP
Links
Other
RRM
family RBPs
Other
Procavia capensis
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF5
Echinops telfairi
ENSETEG00000020396
I
0.744
SRSF5
Loxodonta africana
ENSLAFG00000005260
I
0.744
SRSF5
Gorilla gorilla
ENSGGOG00000016462
I
0.736
SRSF5
Homo sapiens
ENSG00000100650
D
0.736
SRSF5
Felis catus
ENSFCAG00000008848
I
0.736
LOC100053264
Equus caballus
ENSECAG00000026873
I
0.736
SRSF5
Myotis lucifugus
ENSMLUG00000011939
I
0.736
SRSF5
Macaca mulatta
ENSMMUG00000022407
I
0.736
SRSF5
Otolemur garnettii
ENSOGAG00000015122
I
0.736
SRSF5
Ochotona princeps
ENSOPRG00000008286
I
0.736
SRSF5
Oryctolagus cuniculus
ENSOCUG00000009274
I
0.736
Srsf5
Mus musculus
ENSMUSG00000021134
I
0.736
SRSF5
Monodelphis domestica
ENSMODG00000011362
I
0.736
SRSF5
Cavia porcellus
ENSCPOG00000005949
I
0.736
A6MLI3_CALJA
Callithrix jacchus
ENSCJAG00000014884
I
0.736
SRSF5
Tarsius syrichta
ENSTSYG00000007786
I
0.736
SRSF5
Tursiops truncatus
ENSTTRG00000003318
I
0.736
SFRS5
Taeniopygia guttata
ENSTGUG00000011425
I
0.736
SRSF5
Sus scrofa
ENSSSCG00000002312
I
0.736
SRSF5
Pan troglodytes
ENSPTRG00000006488
I
0.736
Sfrs5
Rattus norvegicus
ENSRNOG00000005513
I
0.736
ENSPPYG00000005945
Pongo pygmaeus
ENSPPYG00000005945
I
0.736
SRSF5
Vicugna pacos
ENSVPAG00000006448
I
0.736
A6H7B7_BOVIN
Bos taurus
ENSBTAG00000011596
I
0.736
SRSF5
Anolis carolinensis
ENSACAG00000005143
I
0.736
Ame_R004936
Ailuropoda melanoleuca
Ame_R004936
I
0.736
SRSF5
Canis familiaris
ENSCAFG00000016589
I
0.736
srsf5
Xenopus tropicalis
ENSXETG00000002211
I
0.721
Q5ZLF9_CHICK
Gallus gallus
ENSGALG00000009421
I
0.713
SRSF5
Tupaia belangeri
ENSTBEG00000001972
I
0.705