SRSF5 (Tupaia belangeri)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSTBEG00000001972 T41690_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
SRSF5
M357_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
985_9037021 		0.742
SRSF5
M356_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
984_9037021 		0.742
SRSF5
M355_0.6 		Homo sapiens Sequence logo not available UGGGAGCRGUYRGCUCGY SELEX
Cook et al.(2011)
983_9037021 		0.742
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTBEP00000001702 RRM 6 68
ENSTBEP00000001702 RRM 110 174

Links

Other RRM family RBPs
Other Tupaia belangeri RBPs

80 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SRSF5 Homo sapiens ENSG00000100650 D 0.969
SRSF5 Gorilla gorilla ENSGGOG00000016462 I 0.969
SRSF5 Myotis lucifugus ENSMLUG00000011939 I 0.969
LOC100053264 Equus caballus ENSECAG00000026873 I 0.969
SRSF5 Cavia porcellus ENSCPOG00000005949 I 0.969
SRSF5 Canis familiaris ENSCAFG00000016589 I 0.969
A6MLI3_CALJA Callithrix jacchus ENSCJAG00000014884 I 0.969
SRSF5 Macaca mulatta ENSMMUG00000022407 I 0.969
Srsf5 Mus musculus ENSMUSG00000021134 I 0.969
SRSF5 Pan troglodytes ENSPTRG00000006488 I 0.969
Sfrs5 Rattus norvegicus ENSRNOG00000005513 I 0.969
SRSF5 Sus scrofa ENSSSCG00000002312 I 0.969
ENSPPYG00000005945 Pongo pygmaeus ENSPPYG00000005945 I 0.969
SRSF5 Ochotona princeps ENSOPRG00000008286 I 0.969
SRSF5 Oryctolagus cuniculus ENSOCUG00000009274 I 0.969
SRSF5 Otolemur garnettii ENSOGAG00000015122 I 0.969
A6H7B7_BOVIN Bos taurus ENSBTAG00000011596 I 0.969
SRSF5 Felis catus ENSFCAG00000008848 I 0.969
SRSF5 Tarsius syrichta ENSTSYG00000007786 I 0.969
Ame_R004936 Ailuropoda melanoleuca Ame_R004936 I 0.969
SRSF5 Vicugna pacos ENSVPAG00000006448 I 0.969
SRSF5 Tursiops truncatus ENSTTRG00000003318 I 0.969
SRSF5 Echinops telfairi ENSETEG00000020396 I 0.961
SRSF5 Monodelphis domestica ENSMODG00000011362 I 0.961
SRSF5 Loxodonta africana ENSLAFG00000005260 I 0.961
SFRS5 Taeniopygia guttata ENSTGUG00000011425 I 0.961
SRSF5 Anolis carolinensis ENSACAG00000005143 I 0.961
srsf5 Xenopus tropicalis ENSXETG00000002211 I 0.946
Q5ZLF9_CHICK Gallus gallus ENSGALG00000009421 I 0.938
SRSF5 Ornithorhynchus anatinus ENSOANG00000013336 I 0.907
srsf5b Danio rerio ENSDARG00000027734 I 0.899
SRSF5 Microcebus murinus ENSMICG00000009661 I 0.891
SRSF5 Takifugu rubripes ENSTRUG00000017811 I 0.891
SRSF5 Tetraodon nigroviridis ENSTNIG00000016411 I 0.891
SRSF5 Sorex araneus ENSSARG00000001059 I 0.853
SRSF5 Pteropus vampyrus ENSPVAG00000009828 I 0.845
SRSF5 Gasterosteus aculeatus ENSGACG00000007834 I 0.806
ENSGACG00000011761 Gasterosteus aculeatus ENSGACG00000011761 I 0.791
Srsf5 Dipodomys ordii ENSDORG00000003989 I 0.783
SRSF5 Oryzias latipes ENSORLG00000009268 I 0.783
ENSACAG00000005544 Anolis carolinensis ENSACAG00000005544 I 0.767
srsf5a Danio rerio ENSDARG00000029818 I 0.767
PACS2 Takifugu rubripes ENSTRUG00000010740 I 0.760
XB-GENE-5954653 Xenopus tropicalis ENSXETG00000017937 I 0.760
estExt_fgenesh2_pm.C_690014 Branchiostoma floridae estExt_fgenesh2_pm.C_690014 I 0.752
AAH44085 Xenopus laevis AAH44085 I 0.752
AAH71160 Xenopus laevis AAH71160 I 0.752
XP_002200515.1 Taeniopygia guttata ENSTGUG00000011492 I 0.729
XP_001180940.1 Strongylocentrotus purpuratus XP_001180940.1 I 0.729
XP_798746.1 Strongylocentrotus purpuratus XP_798746.1 I 0.729
Q5ZKT4_CHICK Gallus gallus ENSGALG00000009484 I 0.713
ENSMGAG00000011888 Meleagris gallopavo ENSMGAG00000011888 I 0.713
SRSF5 Dasypus novemcinctus ENSDNOG00000006160 I 0.711
SRSF4 Sus scrofa ENSSSCG00000003588 I 0.705
SRSF4 Tursiops truncatus ENSTTRG00000002572 I 0.705
SRSF5 Procavia capensis ENSPCAG00000004405 N 0.705
SRSF4 Pan troglodytes ENSPTRG00000000445 I 0.705
Sfrs4 Rattus norvegicus ENSRNOG00000010007 I 0.705
SRSF4 Oryctolagus cuniculus ENSOCUG00000001837 I 0.705
ENSPPYG00000001629 Pongo pygmaeus ENSPPYG00000001629 I 0.705
SRSF4 Procavia capensis ENSPCAG00000009879 I 0.705
SRSF4 Oryzias latipes ENSORLG00000009430 I 0.705
e_gw1.89.27.1 Lottia gigantea e_gw1.89.27.1 I 0.705
SRSF4 Cavia porcellus ENSCPOG00000007263 I 0.705
SRSF4 Dasypus novemcinctus ENSDNOG00000000968 I 0.705
Srsf4 Dipodomys ordii ENSDORG00000002459 I 0.705
Ame_R018370 Ailuropoda melanoleuca Ame_R018370 I 0.705
LOC100402973 Callithrix jacchus ENSCJAG00000009971 I 0.705
SFRS6_BOVIN Bos taurus ENSBTAG00000008527 I 0.705
A7MB38_BOVIN Bos taurus ENSBTAG00000013309 I 0.705
SRSF4 Erinaceus europaeus ENSEEUG00000008479 I 0.705
estExt_fgenesh2_pg.C_920027 Branchiostoma floridae estExt_fgenesh2_pg.C_920027 I 0.705
SRSF4 Meleagris gallopavo ENSMGAG00000002400 I 0.705
SRSF4 Macaca mulatta ENSMMUG00000007110 I 0.705
SRSF4 Monodelphis domestica ENSMODG00000011052 I 0.705
SRSF4 Loxodonta africana ENSLAFG00000002575 I 0.705
SRSF6 Gasterosteus aculeatus ENSGACG00000006084 I 0.705
SRSF4 Homo sapiens ENSG00000116350 I 0.705
SRSF4 Gasterosteus aculeatus ENSGACG00000002389 I 0.705
Srsf4 Mus musculus ENSMUSG00000028911 I 0.705