XR_025194.1 (Pan troglodytes)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSPTRG00000013848 T40727_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000023838 RRM 510 576

Links

Other RRM family RBPs
Other Pan troglodytes RBPs

58 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
SCAF4 Felis catus ENSFCAG00000002228 N 1.000
SCAF4 Homo sapiens ENSG00000156304 N 1.000
SCAF4 Gorilla gorilla ENSGGOG00000015557 N 1.000
Scaf4 Dipodomys ordii ENSDORG00000013851 N 1.000
SCAF4 Cavia porcellus ENSCPOG00000012443 N 1.000
SCAF4 Canis familiaris ENSCAFG00000008863 N 1.000
LOC100392289 Callithrix jacchus ENSCJAG00000008993 N 1.000
SCAF4 Loxodonta africana ENSLAFG00000010710 N 1.000
SCAF4 Myotis lucifugus ENSMLUG00000011472 N 1.000
SCAF4 Ochotona princeps ENSOPRG00000007016 N 1.000
SCAF4 Procavia capensis ENSPCAG00000009998 N 1.000
ENSPPYG00000011355 Pongo pygmaeus ENSPPYG00000011355 N 1.000
SCAF4 Oryctolagus cuniculus ENSOCUG00000008336 N 1.000
Scaf4 Mus musculus ENSMUSG00000022983 N 1.000
SCAF4 Macaca mulatta ENSMMUG00000001712 N 1.000
SCAF4 Monodelphis domestica ENSMODG00000021040 N 1.000
SFRS15 Bos taurus ENSBTAG00000018855 N 1.000
SFRS15 Equus caballus ENSECAG00000014248 N 1.000
SFR15_RAT Rattus norvegicus ENSRNOG00000002104 N 1.000
SCAF4 Tarsius syrichta ENSTSYG00000011344 N 1.000
SCAF4 Pteropus vampyrus ENSPVAG00000005220 N 1.000
SCAF4 Spermophilus tridecemlineatus ENSSTOG00000004450 N 1.000
Ame_R017528 Ailuropoda melanoleuca Ame_R017528 N 1.000
SCAF4 Tursiops truncatus ENSTTRG00000010963 N 0.985
SCAF4 Echinops telfairi ENSETEG00000000583 N 0.985
SCAF4 Sorex araneus ENSSARG00000009994 N 0.985
SCAF4 Meleagris gallopavo ENSMGAG00000014515 N 0.970
Q5F447_CHICK Gallus gallus ENSGALG00000015850 N 0.970
SCAF4 Erinaceus europaeus ENSEEUG00000015913 N 0.970
SFRS15 Taeniopygia guttata ENSTGUG00000013464 N 0.955
SCAF8 Danio rerio ENSDARG00000074786 N 0.776
RBM16 Taeniopygia guttata ENSTGUG00000011151 N 0.761
SCAF8 Meleagris gallopavo ENSMGAG00000012762 N 0.761
SCAF8 Anolis carolinensis ENSACAG00000005282 N 0.761
RBM16 Gallus gallus ENSGALG00000013635 N 0.761
SCAF8 Sus scrofa ENSSSCG00000004070 N 0.746
SCAF8 Ochotona princeps ENSOPRG00000018413 N 0.746
SCAF8 Monodelphis domestica ENSMODG00000008301 N 0.746
ENSPPYG00000017121 Pongo pygmaeus ENSPPYG00000017121 N 0.746
SCAF8 Pteropus vampyrus ENSPVAG00000005582 N 0.746
SCAF8 Macaca mulatta ENSMMUG00000015163 N 0.746
SCAF8 Oryctolagus cuniculus ENSOCUG00000026063 N 0.746
SCAF8 Gorilla gorilla ENSGGOG00000008645 N 0.746
LOC100061852 Equus caballus ENSECAG00000005540 N 0.746
SCAF8 Loxodonta africana ENSLAFG00000000022 N 0.746
ENSCPOG00000022216 Cavia porcellus ENSCPOG00000022216 N 0.746
SCAF8 Vicugna pacos ENSVPAG00000012465 N 0.746
Ame_R017029 Ailuropoda melanoleuca Ame_R017029 N 0.746
Q6JDJ9_CANFA Canis familiaris ENSCAFG00000000570 N 0.746
SCAF8 Pan troglodytes ENSPTRG00000018727 N 0.746
SCAF8 Tetraodon nigroviridis ENSTNIG00000016885 N 0.746
SCAF8 Gasterosteus aculeatus ENSGACG00000006909 N 0.746
SCAF8 Homo sapiens ENSG00000213079 N 0.746
SCAF8 Takifugu rubripes ENSTRUG00000009243 N 0.746
LOC100390484 Callithrix jacchus ENSCJAG00000012631 N 0.746
Rbm16 Rattus norvegicus ENSRNOG00000016919 N 0.731
Scaf8 Mus musculus ENSMUSG00000046201 N 0.731
SCAF8 Oryzias latipes ENSORLG00000017358 N 0.716