CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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SRSF6
(
Tupaia belangeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTBEG00000013448
T41787_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000011647
RRM
1
34
EPKNKYGFVEFEDSPDPDDPLFKLNGKELCRERV
ENSTBEP00000011647
RRM
81
146
LIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIR
Links
Other
RRM
family RBPs
Other
Tupaia belangeri
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Q9XSS6_CANFA
Canis familiaris
ENSCAFG00000009289
N
0.871
SRSF4
Microcebus murinus
ENSMICG00000008965
N
0.772
SRSF4
Ornithorhynchus anatinus
ENSOANG00000015169
N
0.772
SRSF4
Spermophilus tridecemlineatus
ENSSTOG00000015908
N
0.772
SFRS4
Gallus gallus
ENSGALG00000001411
N
0.772
SRSF4
Equus caballus
ENSECAG00000021350
N
0.772
SFRS4
Taeniopygia guttata
ENSTGUG00000000765
N
0.772
SRSF4
Canis familiaris
ENSCAFG00000011669
N
0.772
SRSF4
Choloepus hoffmanni
ENSCHOG00000013858
N
0.762