CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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HNRNPM
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000000938
T41844_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000000966
RRM
1
39
MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLK
ENSTGUP00000000966
RRM
103
171
VFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKDGKSRGITVTFEQAIEAVQAISMFNGQLLFDRPMH
ENSTGUP00000000966
RRM
542
564
IFVRNLPFDFTWKMLKDKFNECG
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Hnrnpm
Mus musculus
ENSMUSG00000059208
N
0.756
HNRNPM
Tarsius syrichta
ENSTSYG00000011487
N
0.721
ENSMODG00000003473
Monodelphis domestica
ENSMODG00000003473
N
0.703