CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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DNAJC17
(
Taeniopygia guttata
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSTGUG00000006661
T41914_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000006861
RRM
188
244
GGYSKDVLLQILQKYGDVLNLLISSRKTGSAVVEFATVKAAEMAVKNEVGLLNNPLK
Links
Other
RRM
family RBPs
Other
Taeniopygia guttata
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DNAJC17
Anolis carolinensis
ENSACAG00000003311
N
0.930
DNAJC17
Gallus gallus
ENSGALG00000023982
N
0.912
DNAJC17
Meleagris gallopavo
ENSMGAG00000002902
N
0.912
DNAJC17
Monodelphis domestica
ENSMODG00000000225
N
0.860
DNAJC17
Macropus eugenii
ENSMEUG00000005641
N
0.825
ENSCJAG00000013145
Callithrix jacchus
ENSCJAG00000013145
N
0.807
DNAJC17
Choloepus hoffmanni
ENSCHOG00000009650
N
0.789
DNAJC17
Microcebus murinus
ENSMICG00000005953
N
0.789
DNAJC17
Homo sapiens
ENSG00000104129
N
0.772
DNAJC17
Gorilla gorilla
ENSGGOG00000000051
N
0.772
ENSPPYG00000006360
Pongo pygmaeus
ENSPPYG00000006360
N
0.772
LOC100057200
Equus caballus
ENSECAG00000019839
N
0.772
DNAJC17
Cavia porcellus
ENSCPOG00000014110
N
0.772
LOC100409885
Callithrix jacchus
ENSCJAG00000020803
N
0.772
DNAJC17
Sus scrofa
ENSSSCG00000004762
N
0.754
DNAJC17
Pan troglodytes
ENSPTRG00000006929
N
0.754
ENSMLUG00000014835
Myotis lucifugus
ENSMLUG00000014835
N
0.754
DNAJC17
Otolemur garnettii
ENSOGAG00000000528
N
0.754
DNAJC17
Tupaia belangeri
ENSTBEG00000014488
N
0.754
DNAJC17
Pteropus vampyrus
ENSPVAG00000001843
N
0.750
DNAJC17
Macaca mulatta
ENSMMUG00000013160
N
0.741
ENSGGOG00000028423
Gorilla gorilla
ENSGGOG00000028423
N
0.737
DNAJC17
Canis familiaris
ENSCAFG00000009322
N
0.737
DJC17_BOVIN
Bos taurus
ENSBTAG00000013480
N
0.737
Dnajc17
Dipodomys ordii
ENSDORG00000000579
N
0.737
DNAJC17
Felis catus
ENSFCAG00000014715
N
0.737
DNAJC17
Tetraodon nigroviridis
ENSTNIG00000017455
N
0.724
DNAJC17
Loxodonta africana
ENSLAFG00000014731
N
0.719
DNAJC17
Oryctolagus cuniculus
ENSOCUG00000005573
N
0.719
DNAJC17
Tursiops truncatus
ENSTTRG00000011417
N
0.702
Dnajc17
Mus musculus
ENSMUSG00000034278
N
0.702
RGD1565752
Rattus norvegicus
ENSRNOG00000038337
N
0.702