CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
CG1316
(
Drosophila melanogaster
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0035526
T43062_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0073089
RRM
35
98
NKAHTEEDFREAFSPYGEIEDIWVVKDKHTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDR
FBpp0073089
RRM
126
188
FIVIPKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFENCSAKYK
FBpp0073089
RRM
271
336
VNVSNCVNQDQLWRLFDIIPGLDYCQIMREHGPRTNEALVVYDNPEAAIYAKDKLHGLEYPMGERI
FBpp0073089
RRM
388
447
LSANLPHSILKNIFSCWSGLIDVYLLPNKNCGYVKYAEVESAQLAIRTLNGAEICGTKIK
Links
Other
RRM
family RBPs
Other
Drosophila melanogaster
RBPs
11 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GM14647
Drosophila sechellia
FBgn0169568
N
1.000
GD13832
Drosophila simulans
FBgn0185529
N
1.000
GE21435
Drosophila yakuba
FBgn0068447
N
0.992
GG15216
Drosophila erecta
FBgn0107468
N
0.992
GK10557
Drosophila willistoni
FBgn0212572
N
0.937
GI16592
Drosophila mojavensis
FBgn0139340
N
0.929
GJ12844
Drosophila virilis
FBgn0200079
N
0.925
GF25059
Drosophila ananassae
FBgn0102051
N
0.925
GA12086-RA
Drosophila pseudoobscura
FBgn0072134
N
0.921
GH15941
Drosophila grimshawi
FBgn0123412
N
0.921
GL17872
Drosophila persimilis
FBgn0155475
N
0.921